Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1187 |
Symbol | |
ID | 4478704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1394824 |
End bp | 1396671 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639725742 |
Product | hypothetical protein |
Protein accession | YP_868828 |
Protein GI | 117919636 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAATAA AAACGAACAT CAGCTTAGTC GCATTTACCC TCTCCGCCCT GCTAGCACTG CCTTCCTATG CGGTGCCGAC CTTAAGTGAC TCACATAATG TGGCCAGTGC AAGTGTTGCA GCCCAAAGCG AGTCAGAAAA AGCCAACGCC TTGTTTGAAG CCATCTTCAT GGAAAACATC ATGGCAAGCC CCATTGCGCA AACCTATATG GGCATTAAGC AGGACTATGA TAAGTGGGAC GACATTGGCG ATGAAGCGGA TGCCCGTGAG TTGGCGCGTA CCAAGAAACA GCTAACCGAA GTGAATCAAC TGGATGCGAG TAAGCTTGAT CCACAAACTC GCCTAAGCCT GACGTTACTC ACTCAAAACC TGAATAACGA TATCAAAGAC TATCAGTGGC GTTACCATAA CTACCCAGTA AATCAGATGC ATGGTGGCCA CTCGATGATC GCCTCCTTCC TGATTAATCA GCACCAGATC ACCGATGTCA GCGATGCTAA GGCCTATATC AGCCGCTTAA ATGGCGTGCC CAAACGCCTA AGCCAACTGC AACAGGCGCT AGAAGTGCGC GCTGATAAAG GCATTATTGC CCCTAAATTT GTGTTTGGTT ACGTGATATC TGACAGCCAA AACATCATTA AAGGCGCCCC CTTCGATAAA GGCGAAGACA GTGCCTTGTT AGCGGATTTT CGCAAAAAAG TGAGCGCACT CAGCATCACT GAAGCAGAAA AAGCCCAACT TATTGCCGAT GCAGAAAAAG CACTGGTTTC GCAAGTTGAG CCTGCATACA AGACGCTTAT CGCCTATATC AAAACCTTAG AAGCCAAGGC CGATACCCGC GATGGGGTTT GGAAACTCCC CGACGGCGAG GCGTTTTATA ACAATGCCCT TGCGCGCACC ACGACTACCC AAATGACGGC GGATGAAATC CATCAACTTG GTCTTGCCGA AGTGGAGCGC ATCCATAATG AAATGCGCGC CATCATGAAA AAGGTGAATT TTAACGGCAC CTTGCAAGAG TTCTTCGCCT TTATGCGCGA TGATCCGCAG TTCTATTATC CAAATACCGC CGAAGGCAAA GCGGCATATT TAGCAGATGC AACCAAGCTT ATCGATAATA TGCGCTCACG CTTGGATGAA GTCTTTAAGG TCAAGCCTAA GGCGGCCATG ATAGTCAAAC AGGTTGAAGC CTTTAGGGAA AAATCCGCGG GTAAAGCCTT CTATGAGCAA CCTGCGCCCG ATGGATCTCG CCCTGGTAGC TACTATGCCA ACCTCTACGA TATGAAAGCC ATGCCCAAAT ACCAGATGGA AGCACTGGCT TACCATGAGG GGATCCCAGG CCACCATATG CAAATCGCTA TCTCGCAGGA GCTAAAGGAT ATTCCTAAGT TCCGTAAGTT TGGTGGCTAT ACCGCTTATA TCGAAGGTTG GGGGCTCTAC AGTGAGTCTT TCCCGAAGGA GATGGGCTTA TATGCTGACC CTTACTCCGA TTTTGGTCGA CTGGCGATGG AGTTATGGCG AGCTTGTCGT TTAGTGGTCG ATACAGGGAT CCACGCCAAG AAATGGACCC GCGAACAAGG GATAGCTTAT TACGTCGATA ATACCCCTAA CGCAAAATCC GATGCGAAGA AAATGGTCGA ACGTCATATC GTTATGCCAT CGCAAGCTAC TGCCTATAAA GTTGGGATGA TTAAGTTACT CGAACTGAGA CACAAGGCGG AAAAACAACT GGGTGATAAG TTTGATATCC GGGATTTCCA TACTTTAGTC TTGGCAAATG GCGCGCTGCC TTTAGATGTA CTGGAAGAGC AAGTCGATCA ATGGATTGCT AGTGTTAACA AAGCCTAA
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Protein sequence | MPIKTNISLV AFTLSALLAL PSYAVPTLSD SHNVASASVA AQSESEKANA LFEAIFMENI MASPIAQTYM GIKQDYDKWD DIGDEADARE LARTKKQLTE VNQLDASKLD PQTRLSLTLL TQNLNNDIKD YQWRYHNYPV NQMHGGHSMI ASFLINQHQI TDVSDAKAYI SRLNGVPKRL SQLQQALEVR ADKGIIAPKF VFGYVISDSQ NIIKGAPFDK GEDSALLADF RKKVSALSIT EAEKAQLIAD AEKALVSQVE PAYKTLIAYI KTLEAKADTR DGVWKLPDGE AFYNNALART TTTQMTADEI HQLGLAEVER IHNEMRAIMK KVNFNGTLQE FFAFMRDDPQ FYYPNTAEGK AAYLADATKL IDNMRSRLDE VFKVKPKAAM IVKQVEAFRE KSAGKAFYEQ PAPDGSRPGS YYANLYDMKA MPKYQMEALA YHEGIPGHHM QIAISQELKD IPKFRKFGGY TAYIEGWGLY SESFPKEMGL YADPYSDFGR LAMELWRACR LVVDTGIHAK KWTREQGIAY YVDNTPNAKS DAKKMVERHI VMPSQATAYK VGMIKLLELR HKAEKQLGDK FDIRDFHTLV LANGALPLDV LEEQVDQWIA SVNKA
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