Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1179 |
Symbol | |
ID | 4478696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1387593 |
End bp | 1388168 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639725734 |
Product | hypothetical protein |
Protein accession | YP_868820 |
Protein GI | 117919628 |
COG category | [S] Function unknown |
COG ID | [COG2353] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000115477 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC AACTATTAGC TGCTTTGATT GGTGGGTCTT TACTGGCTCC AATGGCTGCA TCTGCCGCCG ATTATGTAAT TGACCGCGAA GGTGCTCATG CATCTATTAC CTTTAAAGTA AGTCACTTAG GTTATAGCTA TGTCGTCGGT CGTTTTAACG ATTTCAGCGG TGATTTCAGC TACGACGCTA AAAATCCAAC GGCAGCTAAA GTGAATGTTA AAGTGAACAC CTTAAGCGTT GACTCTAACC ATGCCGAGCG TGATAAGCAC ATCCGTAGTG GCGATTTTTT GAATACTGCT AAATTTGCAG AAGCGACTTT CGTTTCGACC TCGGTTGAAG ACAAAGGCAA TGGCGATATG GTTATCACAG GTAACTTCAC GCTAAACGGT GTGACTAAAC CGTTGGCAAT CCAAGCGCAT GCTGTGGGCG AAGGTCAAGA TCCTTGGGGC GGATACCGTG CAGGTTTTAC CGGTACTACC ACGTTTGCGA TGAAAGATTA CGGTATCAAG ATGGATTTAG GCCCAGCGTC TGCCAATGTT GAGTTAGATT TAGTGGTAGA AGGCGTGCGT AAGTAA
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Protein sequence | MKKQLLAALI GGSLLAPMAA SAADYVIDRE GAHASITFKV SHLGYSYVVG RFNDFSGDFS YDAKNPTAAK VNVKVNTLSV DSNHAERDKH IRSGDFLNTA KFAEATFVST SVEDKGNGDM VITGNFTLNG VTKPLAIQAH AVGEGQDPWG GYRAGFTGTT TFAMKDYGIK MDLGPASANV ELDLVVEGVR K
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