Gene Shewana3_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1179 
Symbol 
ID4478696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1387593 
End bp1388168 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content45% 
IMG OID639725734 
Producthypothetical protein 
Protein accessionYP_868820 
Protein GI117919628 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000115477 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC AACTATTAGC TGCTTTGATT GGTGGGTCTT TACTGGCTCC AATGGCTGCA 
TCTGCCGCCG ATTATGTAAT TGACCGCGAA GGTGCTCATG CATCTATTAC CTTTAAAGTA
AGTCACTTAG GTTATAGCTA TGTCGTCGGT CGTTTTAACG ATTTCAGCGG TGATTTCAGC
TACGACGCTA AAAATCCAAC GGCAGCTAAA GTGAATGTTA AAGTGAACAC CTTAAGCGTT
GACTCTAACC ATGCCGAGCG TGATAAGCAC ATCCGTAGTG GCGATTTTTT GAATACTGCT
AAATTTGCAG AAGCGACTTT CGTTTCGACC TCGGTTGAAG ACAAAGGCAA TGGCGATATG
GTTATCACAG GTAACTTCAC GCTAAACGGT GTGACTAAAC CGTTGGCAAT CCAAGCGCAT
GCTGTGGGCG AAGGTCAAGA TCCTTGGGGC GGATACCGTG CAGGTTTTAC CGGTACTACC
ACGTTTGCGA TGAAAGATTA CGGTATCAAG ATGGATTTAG GCCCAGCGTC TGCCAATGTT
GAGTTAGATT TAGTGGTAGA AGGCGTGCGT AAGTAA
 
Protein sequence
MKKQLLAALI GGSLLAPMAA SAADYVIDRE GAHASITFKV SHLGYSYVVG RFNDFSGDFS 
YDAKNPTAAK VNVKVNTLSV DSNHAERDKH IRSGDFLNTA KFAEATFVST SVEDKGNGDM
VITGNFTLNG VTKPLAIQAH AVGEGQDPWG GYRAGFTGTT TFAMKDYGIK MDLGPASANV
ELDLVVEGVR K