| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1166 |
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| Symbol | |
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| ID | 4477879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1376924 |
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| End bp | 1378405 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639725717 |
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| Product | deoxyribodipyrimidine photo-lyase type I |
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| Protein accession | YP_868807 |
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| Protein GI | 117919615 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATA ATCAAACCCC AGCGGCAAAG CACGCGTTGA TGTGGTTTCG TCAGGATCTG
CGTCTAACGG ATAACCAAGC GCTGACGGCC GCCTGTGATT GGGTGCGGCA AGCGCCTGGC
GCAAAACTCA GGGCGATTTA TATTGCGACT CCGAACCAGT GGCTCAGCCA CGATATGGCG
CCGATCCAGA TTGATTTTAT CCAGCGGCAT GTGAATTTAC TTGCCCAAGG ACTGGCAAGC
CTAGGGATTG AATTTGAGCT TATTCAGCTC GATAGCTTTA AAGAGGTGCC CGCTTTTTTA
GCAAGTTACT GCGAAAAACT TGGGGTTGAG CGGGTATTTG CGGGGCGAGA ACCCGAAATC
AACGAGCAAA AGCGCGACCA AGCCTGTCTC GATACGGGTA TCCCCTTAGT GCTCAGCGAC
GAGCATTGCC TATTGCCGCC AGGTACTGTG CTTAACTTAA GCGGTGATAT GTATAAGGTG
TTTACGCCCT TTAGCCGCAA GTGGCGAGAA ATTGCCGCCA AACGCGCCAT TTTTCCGCTT
GCTGTGCCCG CGCCGCTTGG CCCTATGTTA CCTGAACCAA AGCCAATCAG TTTTAAAGAG
CGTTTTCAAT CGACAAGCAA GCTAACCTCG AGCGAGCAAT GGGCGGCGGG AGAGGGGCAG
GCAAAACGTA TTCTTACCGC ATTTATTAAG CAGAAAGTCC AAGACTATAA GCAGGATAGG
GACTTTCCTG CTCTCGATGG CACCAGTGTT ATCTCCCCTT ATTTGGCGCT AGGCGTGCTC
AGCCCAAGGC AATGTATTGC GGCGCTGCTT GGGCGTTTTC CCGATGTGAT TGTCGATGAT
ACTAGCCCTG GGCGAACCTG GTTGAATGAG CTTATCTGGC GGGAGTTTTA TCGTCATTTG
TTGGTGGCTT TTCCTGATTT ATCCAAGGGG CACAACTTTA ATCGTCAGGC CGATCATGTG
CAGTGGCGTA ACAACCAAGC TGAGTTTTTA GCGTGGTGCG AGGGCAAAAC CGGTTATCCG
ATTGTGGATG CGGCGATGCG CCAGCTCAAT CAAACCGGCT GGATGCACAA TCGGCTGCGC
ATGGTGGTGG CGAGCTTTTT AACCAAACAC TTGCTTATCG ATTGGCGCTG GGGTGAACGC
TATTTCCGCC AGCACCTTAT CGACGGCGAT CTGGCGGCCA ATAACGGTGG CTGGCAATGG
TCGGCGGGCT GTGGCTGTGA TGCTCAGCCT TATTTCCGCA TTTTTAATCC CATCAGCCAG
AGCGAAAAGT TTGATCCAGA TGGCAGCTTT ATCCGTAAGT ACTTACCAGA GCTGGCATCT
TGGGGAATCA AGCGTTTGCA CCAACCCAAT ATGCAAAAAA CGCCTTCGTT ATTTGAGGCG
CCAATGCTGG AGTCTGACTC AGCTTATCCC TGTGCGATTG TGGAGCACAA TGCGGCAAGG
GCGAGGGCGC TGGCGGTACT TGGGGTGCTG AAAAAGGCCT AG
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| Protein sequence | MSDNQTPAAK HALMWFRQDL RLTDNQALTA ACDWVRQAPG AKLRAIYIAT PNQWLSHDMA
PIQIDFIQRH VNLLAQGLAS LGIEFELIQL DSFKEVPAFL ASYCEKLGVE RVFAGREPEI
NEQKRDQACL DTGIPLVLSD EHCLLPPGTV LNLSGDMYKV FTPFSRKWRE IAAKRAIFPL
AVPAPLGPML PEPKPISFKE RFQSTSKLTS SEQWAAGEGQ AKRILTAFIK QKVQDYKQDR
DFPALDGTSV ISPYLALGVL SPRQCIAALL GRFPDVIVDD TSPGRTWLNE LIWREFYRHL
LVAFPDLSKG HNFNRQADHV QWRNNQAEFL AWCEGKTGYP IVDAAMRQLN QTGWMHNRLR
MVVASFLTKH LLIDWRWGER YFRQHLIDGD LAANNGGWQW SAGCGCDAQP YFRIFNPISQ
SEKFDPDGSF IRKYLPELAS WGIKRLHQPN MQKTPSLFEA PMLESDSAYP CAIVEHNAAR
ARALAVLGVL KKA
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