Gene Shewana3_1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1132 
Symbol 
ID4477845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1336930 
End bp1337394 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content46% 
IMG OID639725683 
ProductDNA polymerase III chi subunit, HolC 
Protein accessionYP_868773 
Protein GI117919581 
COG category[L] Replication, recombination and repair 
COG ID[COG2927] DNA polymerase III, chi subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00137495 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAG CGCTGTTTTA TTTACTGCCG CCGATGGGCG TGAACACGGC CCTTAATGAC 
ATGTATCAAT TAGCTTGCCG TCTAGCCCAA CAGGGATTTA TAAACCAGCA GCAGGTCTAT
ATTCACTGTC AGGACAAGAA CATCGCCTTC GAAATCGACG AGTTACTATG GCAGTTTGAA
CCCAGTGCAT TTGTCCCCCA TAACCTCAAA GGTGAAGGCC CCACTACTGG CTCACCCGTT
GAAATCGGTT TTGACAGACT CGGCCCAAAC AAAAGTCGCC AACTTCTGAT TAATCTTGCA
GACCAAGTGC CTCCGTTTGC GGTAAACTTT GGTCAAATCT TCGATTTTGT GGCTAATGAC
GACCAACATA AAGCGATAGC ACGTGAACGC TATCGCCAAT ATCGTGGCTT AGGGATTGAA
TTAACAACCC AAAATTTAGC AACACATCCA CTTAATTTAG CTTGA
 
Protein sequence
MTQALFYLLP PMGVNTALND MYQLACRLAQ QGFINQQQVY IHCQDKNIAF EIDELLWQFE 
PSAFVPHNLK GEGPTTGSPV EIGFDRLGPN KSRQLLINLA DQVPPFAVNF GQIFDFVAND
DQHKAIARER YRQYRGLGIE LTTQNLATHP LNLA