Gene Shewana3_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1102 
Symbol 
ID4476437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1295457 
End bp1295951 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content49% 
IMG OID639725645 
Productphosphatidylglycerophosphatase 
Protein accessionYP_868743 
Protein GI117919551 
COG category[I] Lipid transport and metabolism 
COG ID[COG1267] Phosphatidylglycerophosphatase A and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0161628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.229912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTGT TATCCCAAGA TCAGGCGCTG TCGCGCCTGT CTCTTAAAAA TCCGATCCAT 
TTTTTAGCTT TAGGCTTTGG CAGCGGTTTA GCGGCTAAGG CCCCCGGCAC CTTTGGCACC
TTGGCGGCAG TTCCGCTCTA TTTGTTATTG GCTCAATTGC CCTTAAGTTG GTATTTAGTT
GTGACCTTAG TATGCGTACT CGCGGGGATT TATATCTGCG ATAAAGCTGC TAAAGACATG
GGCGTACATG ACCATGGTGC AATCGTTTGG GATGAAGTGG CGGGTCTATT AATCACTATG
GTTGCCGCGC CAGCCGGAGT GCTCTGGTTA GTCGTTGGTT TTGTGCTGTT TCGTCTCTTT
GACATCATCA AGCCTTGGCC AATTCGTTGG CTCGATGCCA AGGTCGAAGG CGGCTTTGGC
ATTATGATAG ACGATGTATT AGCAGGCATT TTTGCGCTTA TTGGTGTGCA GGCCCTGGCG
GCTTTTATCC ATTAA
 
Protein sequence
MKLLSQDQAL SRLSLKNPIH FLALGFGSGL AAKAPGTFGT LAAVPLYLLL AQLPLSWYLV 
VTLVCVLAGI YICDKAAKDM GVHDHGAIVW DEVAGLLITM VAAPAGVLWL VVGFVLFRLF
DIIKPWPIRW LDAKVEGGFG IMIDDVLAGI FALIGVQALA AFIH