Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1098 |
Symbol | |
ID | 4476433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1292284 |
End bp | 1293387 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639725641 |
Product | GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase |
Protein accession | YP_868739 |
Protein GI | 117919547 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase [COG0807] GTP cyclohydrolase II |
TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000281085 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.665879 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTGC ACAGTATAGA AGAGATCATC GAGGATATTC GTCAAGGCAA AATGGTTATT TTGATGGATG ACGAAGACAG AGAAAACGAA GGCGACCTGA TTATGGCGGC CGAGCTGGTG ACGCCTGAAG CGATTAACTT TATGGCGAAA TACGGCCGTG GACTTATCTG CCAAACGATG ACTAAGGCCC GTTGTCAGCA GCTAAACCTG CCCTTGATGG TGACTAATAA CAATGCGCAG TTCTCGACTA ACTTTACGGT ATCGATTGAA GCGGCAGAAG GTGTAACCAC CGGGATTTCG GCCCACGATC GCGCTGTAAC GGTAAAAGCT GCCGTGGCTA AAGATGCCAA GGCATCGGAT TTAGTACAAC CTGGTCATAT CTTCCCATTA ATGGCGCAGG ACGGCGGCGT GTTAACCCGC GCAGGTCACA CGGAAGCGGG TTGTGATTTA GCCCGTTTAG CAGGACTTGA GCCATCGGGG GTGATTGTTG AGATCCTCAA TGAAGACGGC ACTATGGCTC GTCGCCCCGA TTTAGAGATT TTCTCTGAAT TACACGGGAT TAAAATCGGC ACTATTGCGG CGCTTATCGA ATACCGCAAC ACCAAAGAAA CCACTGTCGT GCGCGAAGCC AAATGTAAAC TGCCAACCCG CTTTGGCGAG TTCGACATGG TGACCTTTAG GGATACTATC GACAATCAAC TGCACTTTGC CTTAGTGAAG GGCGAGGTGA AACCGGATTG TTTAGTGCGC GTACACTTAC AAAATACCTT CAACGATTTA CTCCACTCAG AGCGCGATCA GCAGCGTAGC TGGCCGCTTG AAAAAGCCAT GGAGCGCATT TCTGCCGAAG GTGGAGTGTT GGTGCTACTG GGCAATCAAG AGCATACCTG TGAAATTCTC TCTAAAGTCA AAGCCTTTGA AGCAGAAGAT CAAGGTCAAG CGCCAGCCTC TGCAAAATGG CAAGGCACTT CACGCCGCGT GGGTGTAGGT TCGCAAATCC TTGCCAGCCT TGGGGTAACC AAAATGCGTC TCTTGAGTTC GCCTAAGCGT TATCACTCGC TCTCTGGCTT TGGGCTTGAA GTGACTGAAT ACGTAGCGGA GTAA
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Protein sequence | MALHSIEEII EDIRQGKMVI LMDDEDRENE GDLIMAAELV TPEAINFMAK YGRGLICQTM TKARCQQLNL PLMVTNNNAQ FSTNFTVSIE AAEGVTTGIS AHDRAVTVKA AVAKDAKASD LVQPGHIFPL MAQDGGVLTR AGHTEAGCDL ARLAGLEPSG VIVEILNEDG TMARRPDLEI FSELHGIKIG TIAALIEYRN TKETTVVREA KCKLPTRFGE FDMVTFRDTI DNQLHFALVK GEVKPDCLVR VHLQNTFNDL LHSERDQQRS WPLEKAMERI SAEGGVLVLL GNQEHTCEIL SKVKAFEAED QGQAPASAKW QGTSRRVGVG SQILASLGVT KMRLLSSPKR YHSLSGFGLE VTEYVAE
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