Gene Shewana3_1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1092 
Symbol 
ID4476427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1285477 
End bp1286484 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content50% 
IMG OID639725635 
Producthypothetical protein 
Protein accessionYP_868733 
Protein GI117919541 
COG category[S] Function unknown 
COG ID[COG1808] Predicted membrane protein 
TIGRFAM ID[TIGR00271] uncharacterized hydrophobic domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG ATATTAAAGA TCACAAAGAA ATTACCCGCG CGAATATTCG CGTTAATGCC 
CAGCTCGATG TGCCCTTTTT GGCGATGAAC ACCCTAGCGG CCATCATCGC CAGCTACGGA
CTCTTGGCTA ACAGCGCAGC GGTGGTCATT GGCGCCATGA TTGTCGCTAT GCTGTTTTCC
CCCATTTTAG GCTTGGCATT AGGACTGGTC GAAGGGGAAA AGCTGCTAGT TCGCCATGCC
ATTAAAAGTT TAATCGTGGG GAGTATTCTG GTTTATTTCA CCGCCTTTTT AATTGGCTTT
CTGCATTCCG ATATTCCTAT CACGCCGGAG ATCATGGCGA GAACGGCGCC AAACTTTCTC
GATTTAATGG TCGCGTTTGC AGGTGGTGCA GCGGGCGCCT ATGCGACTAT TTCGCCGCGG
TTAAGTACTT CCTTTGTGGG GGTTGCGATT GCTACCGCAT TAGTGCCGCC CCTGTGTGCC
TCGGCGATAT TGCTAGGCCA TGGTAATTTT GAACTCGCCC GAGGTGCCTT CTTACTGACG
TTTACCAACA TAGTCGCCAT CCAATTTGTG TCCTCGGTTG TGCTGTGGTT GAACGGTTTC
CACGGATTTT ATTTTTGGCA AAAAAGCTCG CTGTGGGAGT TGTTGAAACG TAACTTCATT
ACATTGATTC TGCTGGTTAT TTTGATTATC GCCCTCAGCG TGAATCTGCA TAATGTGGTG
GCAAGGCAAT TGTATGAGAG CAAAGTGACT CGCATTGTGA GCGAGCAGTT ACTCAAGTTC
CCCAATATGC GGTTGATTAA AGTCGGGATT GAGGAAGAGG CGAGTCAATG GATAGTGCGG
GTCACCGTTG GCGGCATTAA AAAACCAGAT GCCAGCTTTG TGCGACTACT GGAGAGTGAG
TTGACGCAGA CGGGGCAAGT AAAACCGGCG ACCGTGCGCG TGCGTTACTT TCAGGTCGAT
GTGATTGACC GCGATGGTGA TGTGAAAGCG ATTCAGGAAC AGGATTAG
 
Protein sequence
MSEDIKDHKE ITRANIRVNA QLDVPFLAMN TLAAIIASYG LLANSAAVVI GAMIVAMLFS 
PILGLALGLV EGEKLLVRHA IKSLIVGSIL VYFTAFLIGF LHSDIPITPE IMARTAPNFL
DLMVAFAGGA AGAYATISPR LSTSFVGVAI ATALVPPLCA SAILLGHGNF ELARGAFLLT
FTNIVAIQFV SSVVLWLNGF HGFYFWQKSS LWELLKRNFI TLILLVILII ALSVNLHNVV
ARQLYESKVT RIVSEQLLKF PNMRLIKVGI EEEASQWIVR VTVGGIKKPD ASFVRLLESE
LTQTGQVKPA TVRVRYFQVD VIDRDGDVKA IQEQD