| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1084 |
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| Symbol | |
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| ID | 4476419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1274203 |
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| End bp | 1275315 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639725627 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_868725 |
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| Protein GI | 117919533 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.143794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CCATAATAGC CATTGCCTTA ATTGCTGCGG TTGCCACCGC TGTGAGTTTT
AGTGATGTAC TGCAGGCGGC CAAACCCGAA AGCGCGCCCC ATTTAATGCG CACTGTACCT
GTGGTCACAG GAGAAGTGGT TGAACATCCA CTGGCACAAT CGATTTCACT CATAGGTAAA
CTCGCCGCCG ATCGCGCCGT GGTTATCGCG CCGCAAGTCA CAGGCAAAAT TAAGCAAATC
GCCGTGACAT CGAATCAGGC GGTCAAAAAA GGCCAACTGC TTATCGAACT CGATGATATG
AAAGCCCAGG CCGCAGTAGC CGAGGCCAAT GCCTTTTTAA ATGATGAAAC CCGTAAACTC
AGGGAATTTG AAAAACTCAT CAGCCGCAAC GCCATCACCC AAACCGAAAT CGATGCGCAA
AAGGCCAGCG TCGATATCGC CAGAGCCCGA CTCGCCTCGG CGCAGGCAGA TTTACATTAC
CATTCGCTAA TCGCTCCCTT TGCTGGCAAA ACCGGCCTGA TTAACTTCAG TGAAGGAAAA
ATGGTCAGCA TTGGCACAGA GCTGATGACC TTGGATGATT TATCCAGCAT GCGACTCGAC
CTACAAGTGC CCGAACATTT TCTGTCACAG CTCAGCATTG GCATGCCCGT CTCGGCGACC
AGCCGCGCCT GGCCGGGAGA AACCTTTATC GGCAAAGTAG TCGCCATCGA TCCCCGCGTC
AATGAAGAAA CCTTAAACTT GAAGATCCGC GTACAATTTG AAAACGCGAA AAACCGTTTA
AAGCCGGGCA TGATGATGTC ATCGACCCTC ACCTTCCCGC CGATTTCCGC CCCGATTGTG
CCAGTGCAAG CCTTAGAATA TTCAGGCACT AAGCGCTATG TGTATGTGGT GGGTGAGGAC
CATATCGCCC ATCGCACCGA AGTAATTTTA GGTGCCCGCG TGGGTGACCA AGTGCTTATT
GATTCGGGCC TCAAGATTGG CGACAAAGTG GTGGTGCAAG GGCTAGTGAA CATGCGCGAT
GGCTTAAAGA TCAATGAAGT GGTGCTCGAA GCCAAAAACG ATGCTAACCG TCCAGCGGCC
AAGTCTGACG TCAACACCGC GGAGACGAAA TAA
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| Protein sequence | MKKTIIAIAL IAAVATAVSF SDVLQAAKPE SAPHLMRTVP VVTGEVVEHP LAQSISLIGK
LAADRAVVIA PQVTGKIKQI AVTSNQAVKK GQLLIELDDM KAQAAVAEAN AFLNDETRKL
REFEKLISRN AITQTEIDAQ KASVDIARAR LASAQADLHY HSLIAPFAGK TGLINFSEGK
MVSIGTELMT LDDLSSMRLD LQVPEHFLSQ LSIGMPVSAT SRAWPGETFI GKVVAIDPRV
NEETLNLKIR VQFENAKNRL KPGMMMSSTL TFPPISAPIV PVQALEYSGT KRYVYVVGED
HIAHRTEVIL GARVGDQVLI DSGLKIGDKV VVQGLVNMRD GLKINEVVLE AKNDANRPAA
KSDVNTAETK
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