| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1070 |
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| Symbol | |
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| ID | 4476405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1255491 |
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| End bp | 1257017 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639725613 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_868711 |
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| Protein GI | 117919519 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTATTC TGGGATTTAT CGGTTTAGCA CTGGGCATCA TCTTGATAGC CGTGCTTTAT
ATATTACTCG CTAGATACCA AGCGCTGCGG TTACAGCAGC GATTTTTGGC GCAATTATGC
CCGCAGCTCG ATCAGCAAAA GATTGAACGC CGTCCTTTGA ATGTACCTGT GGTGCCGCAG
GAGTTTGCAC CGCTTTACCA TTCCTTAAAC GAGATGCTCG CAGCGCTGCC TGCGGGCATG
GGTAAGGATA AACTCACAGG GTTGAATAAC CGTGTCGGGC TTAAGCGTTC ACTGACCGCA
TTGATGCCCA TCACCCAAGG CACTTTAGTG CTTATCGATA TTTATCGCTT TCGCTATGTA
AATGATCTCT TTGGTTTTGT GTTTGGCGAT ATTCTGCTTA AACAGTTTGC CGAGCGCTTA
ACCAGTCTAA GCCTTAAACC TAAGTTGATT GCGCGCCTAA ACGGCGATGA GTTTTTCCTC
TATTACGAGC AAAGTCTGTC CGAGGAGCAA CTGCTGCATT TACGCGGTCG ACTACAGGTG
CCCTTTAAAA TTAAAGATAC CCCCGTCAGT GTGCGGATGC AGATTGGGTG TCTGCAACTT
GCTAAGCATC ATGCCGATGT CAGCCATATG CTCAGAAGGC TGGATCTTGC CCTTAAAAAG
GCCCGCGCGA CCCGTAGCGC CATCGCCTGT TACAGTGAGA ATGATGATAT CCGCCAATTG
AGGGAGCTTA AGATTATCGA CAGCCTTCCC AGTGGTTTGC AGCGAAATCA TCTGTATATG
GTGTATCAGC CTAAGCAGGA TATTCACACG GGCGCCTGCA CCCAAGTCGA AGCCTTGATC
CGTTGGGAGC ATGAGGAGCT CGGGTTTATT TCCCCCGGAG AATTTATTCC GCTGGCAGAG
TGCGCCGGGA TGATCGATTT AGTGAGCAAT TGGGCGCTGG AGCAAGTGTT ACAGCAGCAG
GTAAAGTGGC GTGCGGCGGG CGTGTCTGTG TGTGTGGCGC TTAATCTCTC GACTCGAGAT
CTCGACAGTG AAACTTTGCC CCATGATATC GCGACTCGCC TCGAGCATTA TAAATTACCG
CCAGAATGCT TGATGATTGA GATCACCGAG AGCACTCTGA TGGCCGATTT AAACAAGGCC
GTGGATACTT TAGAACAGAT CCGTCGTCTT GGGGTGAAAT TGGCAATCGA TGACTTTGGT
ACGGGTCATT CATCGCTGGC GTATTTAAAG CATTTACCCG CCAATGAAGT CAAAATTGAT
AAAGCCTTTC TTCGGGATCT AGAGCCTAAT CAGCCTTCAG AATATATCCT TGAGGCCAGC
ATTAATATTG CGAAAAAGCT CGGCTATGAG GTGACGGTCG AAGGGGTTGA GACCCTTAAT
ATCCACGATA TGTTAGTGAA GATGGGCGTC GACCGTATTC AAGGGATTTT TTATGCCAAG
CCGATGCGGG CCGCAGAGCT TGAAATGAAC TGGAACCAGC TAAGACCCAG ACCCGAAATG
CTCTGCGTTA ATGGTTCACA TCCTTAG
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| Protein sequence | MVILGFIGLA LGIILIAVLY ILLARYQALR LQQRFLAQLC PQLDQQKIER RPLNVPVVPQ
EFAPLYHSLN EMLAALPAGM GKDKLTGLNN RVGLKRSLTA LMPITQGTLV LIDIYRFRYV
NDLFGFVFGD ILLKQFAERL TSLSLKPKLI ARLNGDEFFL YYEQSLSEEQ LLHLRGRLQV
PFKIKDTPVS VRMQIGCLQL AKHHADVSHM LRRLDLALKK ARATRSAIAC YSENDDIRQL
RELKIIDSLP SGLQRNHLYM VYQPKQDIHT GACTQVEALI RWEHEELGFI SPGEFIPLAE
CAGMIDLVSN WALEQVLQQQ VKWRAAGVSV CVALNLSTRD LDSETLPHDI ATRLEHYKLP
PECLMIEITE STLMADLNKA VDTLEQIRRL GVKLAIDDFG TGHSSLAYLK HLPANEVKID
KAFLRDLEPN QPSEYILEAS INIAKKLGYE VTVEGVETLN IHDMLVKMGV DRIQGIFYAK
PMRAAELEMN WNQLRPRPEM LCVNGSHP
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