Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1068 |
Symbol | |
ID | 4476614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1252828 |
End bp | 1254192 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639725611 |
Product | peptidase U32 |
Protein accession | YP_868709 |
Protein GI | 117919517 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAAAC CTGAGTTGTT ATCTCCCGCT GGGACGCTGA AAAACATGCG TTACGCTTTT GCCTATGGTG CAGATGCCGT GTATGCCGGT CAGCCGAGAT ACAGCCTGAG GGTTCGTAAT AACGACTTCA AAATGGAAAA CCTCGCAACG GGTATCGAAG AAGCCCATGC GCTGGGTAAA AAGCTTTATG TGGTGAGTAA CATTGCTCCC CACAACGCCA AGCTCAAAAC CTATATCAAA GATATGGAAC CGGTAGTGGC GATGAAGCCC GATGCGCTGA TCATGTCAGA TCCAGGCCTT ATCATGATGG TGCGTGAGGC CTTCCCTGAG CAGGTAGTGC ATTTATCGGT GCAAGCCAAC GCCATTAACT GGGCGTCGGT CAAATTCTGG CAGACTCAAG GCATTAAACG GGTGATTTTA TCCCGCGAAT TGTCCTTAGA TGAAATTGAA GAAATCCGTC AACGCTGCCC CGATATCGAG CTAGAAGTGT TTGTCCACGG CGCCCTGTGT ATGGCTTACT CTGGCCGTTG TTTGCTGTCG GGTTATATCA ATAAGCGCGA TCCAAACCAA GGCACTTGCA CTAACGCTTG CCGCTGGAAA TACGATGTGC ACGAAGCGCA GCAAACTGAC TCTGGCGATA TCATTGCCAC CCCCAATGCG GTGCAAATCG AGACGCCAAC CTTAGGCACG GGTCCTGCGA CCGACCAAAT CTTCCTGCTT CAAGAGGCCA ATCGCCCCGG CGAATACATG CCAGCGTTTG AAGATGAGCA TGGCACTTAT ATCATGAACT CTAAGGACTT GCGTGCAATC CAACACGTTG AGCGTTTGGC GAAAATGGGC ATCGACTCGC TGAAGATCGA AGGCCGTACT AAGTCGTTTT ACTATGTGGC CCGTACCGCC CAGCTATACC GTCAGGCCAT CGACGATGCC GCCTCAGGCA AGAGCTTCGA TCGCAGCTTG ATGAACCAAC TCGAAGGCTT AGCCCACCGC GGCTATACGG AAGGTTTCTT ACGTCGCCAC GTACATGATG AATATCAAAA CTACGACTAT GGTTACTCGG TCAGCGATAC CCAACAATTT GTGGGTGAAT TAACCGGTAA ACGCAATCTG GCTGGCCTTG CCGAAATCGA AGTGAAGAAC AAATTCTCTG TCGGTGATAG TGTTGAATTA ATGACGCCAC AGGGCAATAT CAGCCTCACC ATCGAGCAAC TCGAAAACCG CAAAGCCGAA TCGGTTGAAG CGGGATTAGG TTCGGGCCAT ACCGTTTACT TGCCCGTCCC GAAAGAGGTT GATCTGCACC ACGGCATTTT ACTGCGTAAC CTGCCCCAAG GTCAGGATAC CCGCAACCCA CACGAAGCAG GCTAA
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Protein sequence | MFKPELLSPA GTLKNMRYAF AYGADAVYAG QPRYSLRVRN NDFKMENLAT GIEEAHALGK KLYVVSNIAP HNAKLKTYIK DMEPVVAMKP DALIMSDPGL IMMVREAFPE QVVHLSVQAN AINWASVKFW QTQGIKRVIL SRELSLDEIE EIRQRCPDIE LEVFVHGALC MAYSGRCLLS GYINKRDPNQ GTCTNACRWK YDVHEAQQTD SGDIIATPNA VQIETPTLGT GPATDQIFLL QEANRPGEYM PAFEDEHGTY IMNSKDLRAI QHVERLAKMG IDSLKIEGRT KSFYYVARTA QLYRQAIDDA ASGKSFDRSL MNQLEGLAHR GYTEGFLRRH VHDEYQNYDY GYSVSDTQQF VGELTGKRNL AGLAEIEVKN KFSVGDSVEL MTPQGNISLT IEQLENRKAE SVEAGLGSGH TVYLPVPKEV DLHHGILLRN LPQGQDTRNP HEAG
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