Gene Shewana3_1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1060 
Symbol 
ID4476606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1242489 
End bp1244363 
Gene Length1875 bp 
Protein Length624 aa 
Translation table11 
GC content52% 
IMG OID639725603 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_868701 
Protein GI117919509 
COG category[R] General function prediction only 
COG ID[COG3176] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAT TAACTCCTCA TACCCCAAAT ACCGAGTCAT TAAGCGCCAA CGCATTAACG 
CAGGACGCAG CCATGCCACT GCCCACCTTA AAAGCCAGTT CGATGATCTT TACCGTCGAT
AATGTGGTAG AGCAAAACCT GCCCGCCCTC AAGGACAAAC CTTGGTTAGC CAAGCCAACT
AAGGCCATGC TGCGCTACCT GTTGAATGAA AAACAATGTA ACGATATCGC CAATCAATTT
GCCTATCTGC AAGGGGTCGA TTTTGTCGAG CAAGTGCTCG CCAGCTTCGA TTTTAGTTTT
ACCGTGCCCG CTAACGAGGT CGAAAACATT CCCTGCGAAG GCCGCGTGGT GATCTTCGCC
AATCATCCGA TTGGCTCCCT AGATGCCCTT GCTCTGATTA AACTCGTCAG CGAAATTCGC
CCTGATATCA AGGTTGTGGC GAACGAGCTT CTGATGGCGC TCGAGCCTTT GCATTCTATC
CTGTTGCCAG TGCGTAATAT GACGGGCGGC ACGCCGAAAC AGCACCTCGA AAAAATCCAC
CAGCATCTGC GTAATGAAGG CGCGGTACTG ATTTTCCCGT CGGGAGAAGT CTCTCGCCTG
CGTCCCAATG GCGTGCGCGA TACCCAGTGG CACTCAGGCT TTTTAAAGAT GGCGATTTCC
TGTAATGCGC CGCTGCTGCC AATCTTTTTG GATGCTAAAA ACTCGGCCAC CTTCTACGGC
GCCTCGATGA TTTACAAACC CTTAGCCACA TTGCTACTGG TCAAGGAGAT GTTTAAACAG
GCTAAGCGCA ATATGCCTAT TCGCATCGGC GAGCTTATCC CGAATGAAGC CGTGCGCTCG
ATGGATTTTC CGCTAAAGAC CAAGATAAAA CTGCTGAAGA ATCATCTGTA TCGCATCGGC
AAAGATAAAG ACCCGCTGTT TATCACCCAA AGCGCCATCG CTCACCCTGA GTCGCGCCGA
GAGCTGCAAG CCGCGCTGCA ACAATGTGAA CTCCTCGGTG AAACTCAAGA TAACAAGCTG
ATTTATTTGT ATCAGCATCA GGACAGCAAC CCCATCATGC GCGAAATTGG TCGCCTGCGG
GAAATCGCCT TTCGCGCCGT TGGCGAAGGC ACGGGCAAGC GCCGCGATAT TGATAAATAC
GATTCCTACT ACCAACATCT GGTGTTGTGG GATAAAGAGC AGTTTGAAAT TGTCGGCGCC
TATCGTTTCG CCAGCGGCGA GCAAGTGCTA AATCGCTACG GCGACAACGC CCTCTACAGC
CAATCCCTGT TCCAATATGC CGACGGCTTT ATGCCCTTCG TCAAACAAGG CTTAGAACTT
GGCCGCAGCT TTGTGCAGCC CAAATATTGG GGCAAACGCA GTCTCGACTA CCTCTGGTTT
GGCATTGGTG CCTTCCTCGC CAAACATCCC GAATACCGCT ACCTGTTTGG CCCTGTTTCC
ATCAGTAATC AACTGCCTGG CAGCGCGCGG GAGATGTTAG TGCATTTCTA CTCCAAGGAG
TTTGCGCCAG CAGAGCAGCT GGCGGTGTCT ATGTCCCCCT TTGGCCTGTC CAAGCAACGC
AAGTTGCAGC TGGATGAACT CTATTCGGGT GAGGATTACC CAAGCCACTT TAAGCAACTC
AAACAAATGC TGGCGAGTAT GGGCGCCGCT GTGCCAACCC TGTACAAGCA GTATGGCGAG
CTGTGCAAAC AGGATGGGGT GAAGTTTCTC GCCTTCGGGA TCGATGCCGA TTTCGGCGAT
TGTGTCGATG GCTTAGTCTT GGTCGATACC CATAAACTCA AGGGGAAAAA GTATCAACGT
TATATCGGCG CCCATTTGCC CGAAGACTTA CGCAACCCTT TGATGGCAGA GGATGAAACC
GACGAGCAGG ATTAG
 
Protein sequence
MNQLTPHTPN TESLSANALT QDAAMPLPTL KASSMIFTVD NVVEQNLPAL KDKPWLAKPT 
KAMLRYLLNE KQCNDIANQF AYLQGVDFVE QVLASFDFSF TVPANEVENI PCEGRVVIFA
NHPIGSLDAL ALIKLVSEIR PDIKVVANEL LMALEPLHSI LLPVRNMTGG TPKQHLEKIH
QHLRNEGAVL IFPSGEVSRL RPNGVRDTQW HSGFLKMAIS CNAPLLPIFL DAKNSATFYG
ASMIYKPLAT LLLVKEMFKQ AKRNMPIRIG ELIPNEAVRS MDFPLKTKIK LLKNHLYRIG
KDKDPLFITQ SAIAHPESRR ELQAALQQCE LLGETQDNKL IYLYQHQDSN PIMREIGRLR
EIAFRAVGEG TGKRRDIDKY DSYYQHLVLW DKEQFEIVGA YRFASGEQVL NRYGDNALYS
QSLFQYADGF MPFVKQGLEL GRSFVQPKYW GKRSLDYLWF GIGAFLAKHP EYRYLFGPVS
ISNQLPGSAR EMLVHFYSKE FAPAEQLAVS MSPFGLSKQR KLQLDELYSG EDYPSHFKQL
KQMLASMGAA VPTLYKQYGE LCKQDGVKFL AFGIDADFGD CVDGLVLVDT HKLKGKKYQR
YIGAHLPEDL RNPLMAEDET DEQD