| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1053 |
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| Symbol | |
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| ID | 4476599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1232211 |
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| End bp | 1235264 |
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| Gene Length | 3054 bp |
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| Protein Length | 1017 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639725596 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_868694 |
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| Protein GI | 117919502 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR02956] TMAO reductase sytem sensor TorS |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.94198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCCTT TATCTTTATC GCGAAGTAGT TTAACCGGCA GACTTATGCT CGCCTTCGGC
GTGCTTGGGG TATTGCTGTT GCTACTGGTT AGCTTAGGTA GCCTGAGTTT GCATTGGCTC
AAACAGGCCG ACAGTTATCT GTATGAAGAA TCCTTACCCG CCTCTCAAGC CGCGCGCCAA
TTAGTGCAGG CCTCTAATGC CTTATCCGAT GGCGTGACCC AGTTAGGCCA AGTAGAGGAT
GAGCGGCAGC GGGAATTTAT CGGCCGTAAG CTCAGCCTTG AAAGCGCCAC AATGTTAAAT
AGCATCAAAG TGTTACTGAC ACTGGATGTG AACGAGGATA ATCATTTATC CGTATTAGCT
GGGCAAATCA TCGAGCAATT AACCTTACTG GGTAAGAGTG TGGGCCAGCG CATTACCTTA
GGCGATGAGT TGCAGCTCAG AGCCCGCGAA TTATCGGTTG CCGCAGGCCG AGCCTCTGAG
CTATTGCAAT CCGAATTAGC GGTTGTCGAC TCGGCGATTT TGGCAAAACT CAGCCAAGCC
TATCCGGATA TGGCGGGGGA TAAACGCAGT GGTCAATTGC TCGATGATGT GATTGAGCGA
GAGTTAGATG TGCAGGAGCA GCTCAACCGT GTGCTCAAGT TAGTGCATCA AATTGCGCTG
CTCAGTCAGT TATTTGAGGC ATCCGAATTA CAGTCCGAAC TGCAATTGAG TGTTCCCCGT
TTATTGGCCA CCTTTGCCAG CACTGCACCA TCCCACCCCA TGGCGCAGAA TCATCCAGAT
CATCCAAAGC AAGGGACGGC TATCGAGCTG GCGACTACTG AGGCGCCAAC GGCAGAGGTG
GGTATCGATT TAATGGCGCT CACCACAGTG GCTGAGCTTA TCCGCGACCC CGGCAGGCTC
AATGCGCTAA AGGCGGAGCT GGCTATTCTT CTTCATACCC CAAAAATCAT TAAATTACAG
CGAGAACTGA GCCAAAGCCT GCAGCGCCAA CAGCGTCAGC AGCAGGAGTT AGCGGAAAAA
CTCTATAGCC TCAACACGCT GGTGGACAGT GCGCTTAATC AACAGCAACA GCGGGCAGAG
CTGGCGCGAA GTGATTATTT AATGCAGTTG TCTTACGCCC GCTTGGGGCT GTGGGGCACG
GGTATATTAA TGTTGGTTAT CATGGCGGTC GTGGTCTATC GAGTGATCTA TCGCGGCATT
GCCTTGAGGT TAAATCAGGC GACCGAGGCC ATGTCGCGCT TAAGTTTAGG GGACACCAAT
ATGAGCCTCG ATGCCCACGG CGACGATGAA TTGACCGCCA TGGCCAATGC TATCGAGGCA
TTTAAGCGAA AAACCGCCCA TAACCTGAAA TTGCAGACGG ATTTACGCCA GGTCGCCGAT
GAGCTGACCG AGCATAAAAA GGCCCTCGAA CAAACCGTGG CCACGCGCAC GCAGGAATTG
GCCGAAGCCA ACCTGCGCCT CGATGCGGAG GCCAAAGGCC ACGCTAAGGC AAGAATCGTT
GCCGAGGAGG CGAGTCAGGC AAAATCCCAA TTCTTGGCGA CCATGAGCCA TGAAATTCGC
ACCCCGCTCA ACGGTTTACT CGGGACGCTC ACCTTGCTCG GCCATAGTCA ATTACCGCCA
GCGCAGCAAC AGATGCTCGC GCTGTCGCAA TACAGCGGCA CGCTGCTGCA AACCGTGCTG
AGCGATATTC TCGACTTCTC CCGCCTCGAG CAGGGCAATT TAACCAATGA GCCGCGGCCA
ACGGATATCA ACGCTCTGCT CGATGAAGTG CTGGCAATCA TGGTGGCGGG CGCCAATTTG
GCGGGATTGA GCCTAAGGCT GAATTGTCCC CAGTTACCCG CCTGTATTCA TATCGATGGC
CCTAAGCTGA GGCAAGTGCT GTTTAACTTG ATTGGTAACG GCATAAAATT CACCCCCGAA
GGCGGCGTGA GTCTCAATGT TAGCGTACGA GGCGATAAGT TAGCCTTTGT GGTGGCCGAT
ACCGGCGTGG GGATTGCGCC CGAGGTGCGC GAGCAATTAT TTATGCCTTA CTGCGTATTG
CCTAATCAGG GGCGCAGCCG TGGGACAGGC TTAGGGCTTG CCATCTGCAA ACAGTTAGTT
GAACTGATGG ATGCCGAGGG GCCAGGCATT TGGGTTAAGA GCGAGCCAGG CAAGGGCAGC
GAGTTTGGTT TTGAGCTGAG CTTTACCCAG TGTGATAAGG CATTAGATAC GCAAACTCAG
GTGCAAAAAC GGGTTAATCC CCAACGGGTG TTAGTGATTG AAGACAACAA GGTCAATGCC
ATGGTCGCGC AGGGATTTTT GGCGCATTTA GGCCACAGTT CCAGCTTGGC CGTCAGTTGT
CAGCAGGCGC TGGCGCATGT GAGTGGCGAT AAGGCATTCG ATGCCGTGAT GCTCGATATT
CAGCTGAGTG ATGGCTCTGG ACTCACACTA TTACCCCAGT TAAAGGCGTT ATTCGCCAAT
GACAATGTGA AGTTTGCCGC CTTTACCGCG CAGATGCAGA CGGAGGAGCT TAGCCTGTAT
CGGGAGGCTG GGTTTGATAC TGTGTTGGCT AAACCCTTGA GCCTGCAAAC CCTGACAGAA
TGGTTAGGTG TTGCGCGTGT GTCTGCTTCA ATACCAGCTT CACTAAGTGA GTCATCGGCG
CACTCGCCAC AATCGCTTCA ATCGTCGAAC AATGCCGAAC CTACCAGCCA TAACCATCAA
GCAGAAACCT TGTTAGATCT TAACCAGTTA CAGCAAGATC TTGAGGTCTT AGGCGTGAAA
GCCGTGAGTG ATATGTTGGC GCTCTATCGA ACCTCCAGTG CCGAGCAAAT GGAGCGACTC
TCGGCGCTAA GCTCTGTGGC GCATTTCAGT GAGGGCGCAA AACTATTGCA CTCGCTTAAG
GGCAGCAGTG CCAGCATGGG GCTAAAAGCA TTGACTCAGT GTTGTCAGCA GTGGGAGAAA
GCACTCAACA CCACAGGGGA AAATGCATTG GATAGCAAGG CGGTGACTGA ATTAACCGCC
TGCTGGCAGG CGTCGATAAC AGCGATTGAG CAATGGTTGG CAACAAAGGG CTAG
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| Protein sequence | MAPLSLSRSS LTGRLMLAFG VLGVLLLLLV SLGSLSLHWL KQADSYLYEE SLPASQAARQ
LVQASNALSD GVTQLGQVED ERQREFIGRK LSLESATMLN SIKVLLTLDV NEDNHLSVLA
GQIIEQLTLL GKSVGQRITL GDELQLRARE LSVAAGRASE LLQSELAVVD SAILAKLSQA
YPDMAGDKRS GQLLDDVIER ELDVQEQLNR VLKLVHQIAL LSQLFEASEL QSELQLSVPR
LLATFASTAP SHPMAQNHPD HPKQGTAIEL ATTEAPTAEV GIDLMALTTV AELIRDPGRL
NALKAELAIL LHTPKIIKLQ RELSQSLQRQ QRQQQELAEK LYSLNTLVDS ALNQQQQRAE
LARSDYLMQL SYARLGLWGT GILMLVIMAV VVYRVIYRGI ALRLNQATEA MSRLSLGDTN
MSLDAHGDDE LTAMANAIEA FKRKTAHNLK LQTDLRQVAD ELTEHKKALE QTVATRTQEL
AEANLRLDAE AKGHAKARIV AEEASQAKSQ FLATMSHEIR TPLNGLLGTL TLLGHSQLPP
AQQQMLALSQ YSGTLLQTVL SDILDFSRLE QGNLTNEPRP TDINALLDEV LAIMVAGANL
AGLSLRLNCP QLPACIHIDG PKLRQVLFNL IGNGIKFTPE GGVSLNVSVR GDKLAFVVAD
TGVGIAPEVR EQLFMPYCVL PNQGRSRGTG LGLAICKQLV ELMDAEGPGI WVKSEPGKGS
EFGFELSFTQ CDKALDTQTQ VQKRVNPQRV LVIEDNKVNA MVAQGFLAHL GHSSSLAVSC
QQALAHVSGD KAFDAVMLDI QLSDGSGLTL LPQLKALFAN DNVKFAAFTA QMQTEELSLY
REAGFDTVLA KPLSLQTLTE WLGVARVSAS IPASLSESSA HSPQSLQSSN NAEPTSHNHQ
AETLLDLNQL QQDLEVLGVK AVSDMLALYR TSSAEQMERL SALSSVAHFS EGAKLLHSLK
GSSASMGLKA LTQCCQQWEK ALNTTGENAL DSKAVTELTA CWQASITAIE QWLATKG
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