| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1049 |
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| Symbol | |
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| ID | 4479394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1228303 |
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| End bp | 1229667 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639725592 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_868690 |
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| Protein GI | 117919498 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.357607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGA ATAAAACCGC GTACGTGTGC AATGAGTGTG GACAGGATTT TCCACGCTGG
CAAGGGCAGT GCAGTGCTTG TCAGGAGTGG AATACGATAA CCGAAGTGCG TTTAGGCGCC
GCCTCGCCCG GACGGGGAAC TAAGTTTGCG GGTTATGCCG GTGCTGGCAG TAGCGAAGTC
AAAACCTTAG ACCAAATTGA CCTTAATGCC TTACCACGGA TTGTGAGCCA TTTTGGCGAG
CTCGACCGCG TGCTCGGGGG CGGCATAGTG CCAGGCTCAG CGATTCTGAT TGGCGGTCAT
CCCGGTGCCG GTAAGAGTAC GCTGTTACTC CAAACCCTGT GCCATTTAGC CGAGCAAATG
CCTGCACTTT ATGTGACGGG GGAAGAGTCC CTGCAGCAAG TCGCTATGCG CGCTCATCGC
TTAGGGCTGC CAACCAATAA ACTGCGGATG TTATCTGAGA CCAGTGTGGA GCAGATCTGC
GAAGTCGCCC TGCAAGAATC GCCAAAAGTC ATCGTCGTCG ACTCTATTCA AGTCATGCAC
ATGAGCGATG TGGCATCGAG CCCCGGCAGT GTGTCGCAGG TGCGTGAATC GGCCTCCTAT
TTAACTCGCT TTGCCAAGCA AAACGGCATT GCCGTGATTA TGGTCGGCCA TGTGACCAAA
GACGGTAGCC TCGCCGGGCC TAAAGTGCTT GAGCACTGTA TCGATTGTTC TGTGATGTTT
GAAGGGGATA GCGACAGCCG TTATCGTACC TTGCGCTCCC ACAAGAACCG TTTCGGGGCG
ATTAACGAGT TAGGCGTATT CGCCATGACT GAGCGTGGTT TGAAGGAAGT GGCTAACCCT
TCGGCGATTT TCCTCTCCCG CGGTGAAGAA GAATCCTCTG GCTCCTTAGT GATGGTGGTG
TGGGAAGGTA CGCGTCCGCT GTTGGTAGAA CTTCAGGTGC TGGTGGACAA TTCGGCGATG
TCGAACCCAC GCCGCGTGGC AGTGGGGATG GATGCAAACC GTTTAGCCAT GCTACTGGCA
GTGATGCATC GCCATGGTGG GTTACAAATG TCGGATCAGG ACGTGTTTGT CAACGTCGTT
GGTGGGGTTA AAGTGACAGA AACCAGTGCC GACCTAACCT TGTTGCTGGC CATGGTGTCG
AGTTTCCGTG GCGATATTTT ACCGAGCGAT TTAGTGGTGT TTGGTGAAGT GGGGTTATCC
GGGGAAATTC GCCCCGTGCC CAATGGTCAA GAACGTCTCG TCGAAGCCGC CAAACATGGC
TTTAAGCGGG CGATTGTGCC CCGTGCCAAT GTGCCAAAAA AGCCGCCCGC AGGTATGGAA
GTGGTGGGTG TGGCAAAATT ATCCGAAGCC CTCGAAGCGA TATAA
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| Protein sequence | MAKNKTAYVC NECGQDFPRW QGQCSACQEW NTITEVRLGA ASPGRGTKFA GYAGAGSSEV
KTLDQIDLNA LPRIVSHFGE LDRVLGGGIV PGSAILIGGH PGAGKSTLLL QTLCHLAEQM
PALYVTGEES LQQVAMRAHR LGLPTNKLRM LSETSVEQIC EVALQESPKV IVVDSIQVMH
MSDVASSPGS VSQVRESASY LTRFAKQNGI AVIMVGHVTK DGSLAGPKVL EHCIDCSVMF
EGDSDSRYRT LRSHKNRFGA INELGVFAMT ERGLKEVANP SAIFLSRGEE ESSGSLVMVV
WEGTRPLLVE LQVLVDNSAM SNPRRVAVGM DANRLAMLLA VMHRHGGLQM SDQDVFVNVV
GGVKVTETSA DLTLLLAMVS SFRGDILPSD LVVFGEVGLS GEIRPVPNGQ ERLVEAAKHG
FKRAIVPRAN VPKKPPAGME VVGVAKLSEA LEAI
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