Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0940 |
Symbol | |
ID | 4478866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1101661 |
End bp | 1102449 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639725473 |
Product | Na(+)-translocating NADH-quinone reductase subunit C |
Protein accession | YP_868581 |
Protein GI | 117919389 |
COG category | [C] Energy production and conversion |
COG ID | [COG2869] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC |
TIGRFAM ID | [TIGR01938] NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0376785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCTAGTA ATAAAGATTC GTTCGGCAGA ACGTTATTTA TCGTCGTTGG CTTATGCCTA ATTTGTGCGA TATTCGTGTC GACTGCGGCA GTATTACTGC GCCCAACTCA AGCAGAAAAC AAGCTGCTTG ATAAGCAAAA GTACATCCTC GAAGCTGCGG GTCTGATTGA CACGAAAGCG GGCAAAGTAA CCAAAGCTCA GATTTTGGAT ACTTACGGCA AGCACATTGA AGCTAAGTTA GTTAACTTAA AAACCGGTGA TTGGGTTGAA GGTGTTGATG CCAACACATT CGATCAACGC AAAGCGTCTC GCGATGTGAA AACCTCTTTT GTACCTGAAA ACGACATCGC TTCGGTTAAG CGTGTTGCTG AAGATGCAGT GGTTTATTTA GTGCGTGATG AACAAGGTAA GTTAACCAGC GTGATCCTGC CAGTTCATGG TTATGGCCTG TGGTCGACTA TGTATGCTTT CCTCGCGTTA GATGCTGATC TGAACACGAT TCAAAGCTTA GTGTACTACG AGCAAGGTGA AACCCCAGGT CTTGGTGGTG AAGTGCAAAA CGCTCAGTGG AAAGCGAAAT GGCACGGTAA AAAGTTATTT GATGAGCAAG GTAACATTGC TATCAGCGTA ACTAAAAACC CAGCTGTGGC TAGCACTGAA TACGGTGTGG ATGCATTATC CGGCGCGACT CTGACCAGTA ACGGTGTTCA ACACTCTCTG ACATTCTGGT TAGGTAAAGA AGGTTTTGCG AGTTTCATTG AAAAAGCACG CAATGGAGGT CTCAGCTAA
|
Protein sequence | MASNKDSFGR TLFIVVGLCL ICAIFVSTAA VLLRPTQAEN KLLDKQKYIL EAAGLIDTKA GKVTKAQILD TYGKHIEAKL VNLKTGDWVE GVDANTFDQR KASRDVKTSF VPENDIASVK RVAEDAVVYL VRDEQGKLTS VILPVHGYGL WSTMYAFLAL DADLNTIQSL VYYEQGETPG LGGEVQNAQW KAKWHGKKLF DEQGNIAISV TKNPAVASTE YGVDALSGAT LTSNGVQHSL TFWLGKEGFA SFIEKARNGG LS
|
| |