| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0932 |
|---|
| Symbol | |
|---|
| ID | 4478858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 1092050 |
|---|
| End bp | 1093183 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639725465 |
|---|
| Product | methyltransferase small |
|---|
| Protein accession | YP_868573 |
|---|
| Protein GI | 117919381 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAC AATTTTCAGT GGCAGGGATT GAGCTTGAAC TCTTTCGCTA CCCCGCTTCG
CAGGAATCCA ATCTCCAAGC TTGGGATGCG GCAGACGAGC ATTTGATTAA CACCCTAGTA
GAAGGCGGAC AAACCGCGGT GCCAACGGCC ATTATCAACG ACAGCTTTGG CGCCTTAAGC
TGCGCCCTAT CGCGACTTAA TCCCGATTGG CCACTGAATG TCGAAACCGA TGCCAGAACC
AGTTTTTTAG GTGCAGAGCA AAATCATCAT CGCAATCAGT TACCTATGGA TAACCTAACC
AGGTTTACCA GTCGCGATGC CTTGCCTTGC GATCTCGCCC TCGTATTGAT GAAGCTGCCT
AAAAACCTTA CTTACTTTGC CCACCAGCTG ATGCGCTTAT CGCAAGTGTT GCCCGCGGGC
TGCAAAGTGT TGGTTGGCGC AAAAGCCAAG TCCATCAACG CGAGCTTATT GGAAGTATTC
GCGACACACT TAGGGCCAGC AAGCGCCAGC CTCGCTTGGA AGAAAACCCG CGTCATCACC
TGTATTAGCG ATGGCAAGCC ACGCGCCTTA CCGAAGGAAG TCACTTGGGA TATTCCCGAA
TTCAACCTCC ACATCAGTAA TTTAAGCAAT GTGTTTGCCG CCAATAAACT CGATATCGGT
GCGCGCATTA TGTTGGATAA CCTCCCTCAG GGCGACTTTA AAACGATTGT CGACCTAGGT
TGTGGCAATG GCGTGCTAGG TCTGCGTGCG GCCCAGTTAT ACCCTAATGC CGATATCCAT
TTTATTGATG ATTCCGAAAT GGCGGTGGCC TCGGCAAAAG CCAACTGGGC AAACAACCAA
CTCCCCGCGG AAAAAGGCCA TTTCCATTGG GATGATTGCA TGACCCATTT ACCCGATGGT
GTAGAACCCG ATTTAGTGCT CTGCAATCCG CCCTTCCATC AGGGCGAGGC GATTACCGAC
CACATTGCTT GGCAGATGTT TTTAGACGCG CGGCGCCGAC TCAAAAATGG CGGCATTTTA
CATATAGTGG GGAATCGCCA CTTGGCTTAC CACGTCAAAT TGCAGCGTTT ATTTAAAAAC
TGCACCACAG TCGCCTCCAA CGGCAAATTT GTGATCCTGC AAGCGCAGAA ATAA
|
|---|
| Protein sequence | MTTQFSVAGI ELELFRYPAS QESNLQAWDA ADEHLINTLV EGGQTAVPTA IINDSFGALS
CALSRLNPDW PLNVETDART SFLGAEQNHH RNQLPMDNLT RFTSRDALPC DLALVLMKLP
KNLTYFAHQL MRLSQVLPAG CKVLVGAKAK SINASLLEVF ATHLGPASAS LAWKKTRVIT
CISDGKPRAL PKEVTWDIPE FNLHISNLSN VFAANKLDIG ARIMLDNLPQ GDFKTIVDLG
CGNGVLGLRA AQLYPNADIH FIDDSEMAVA SAKANWANNQ LPAEKGHFHW DDCMTHLPDG
VEPDLVLCNP PFHQGEAITD HIAWQMFLDA RRRLKNGGIL HIVGNRHLAY HVKLQRLFKN
CTTVASNGKF VILQAQK
|
|---|
| |