Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0895 |
Symbol | |
ID | 4477106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1042753 |
End bp | 1044645 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639725431 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_868539 |
Protein GI | 117919347 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.174985 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGATCAA CACTCAAAAC CCGCTTACTC TTTAGTAGTC TCTTCGCCGT TCTCATTACT GTCGCAGTGC TGGTAAGCAT TTCAAGTTAC TTCATTAGAA ATAATGCCTT AGAAAATACT CAACATGAAA TTGATCAACT GGCGAACACC TTTGCCGAAG GTATTGGCCT GTGGATGCAA GATAGAAAAA TGGCCATCAC TAGTCTTAAA AAGACCATAG AGGCCGATCC CAGTGTGCAG ATCACCCCCT ATTTATTACA AGCCCATAAT GGTATGGGAT TCGCGCTGAC CTATTTTGGA GATGAACAAG GCAACATGTA TCGCCAAGAT CCTGCGCTTA ACGTCGCTAA CTATGACCCC AGAATTCGTC CTTGGTATAT GGATGCCAAA GCCGCCAATG CCATTGTGAT GACCGCGCCC TATGTCAGCG CCACCTTAAA AAAACAAGTA GTGACCATTG CAGAACCTGT GACTGTCTCT GGTAGTTTGT TCGGGGTTGC CGCAGCTAAC CTCACCATAG ACCAACTCAC AGATGCGGTG CAGCGCCTTC AAGTGCCAGG CAAAGGCTAC ACCATCATGG TGGACAAGAC AGGGCTTATC ATTAGCCATC CTAAAAGCCA GCTCAATAAC GAACAACTCA ATAAAATCGA TAACAGTTTT ACCCCGAGCT GGTTATCTCA ACGTGCCAAC GCCAATACCT TAGAAGAGCG CGAACTCGAT GGCGAGACCC AACTTATTTA TGTTGCGGCT GTACCATCCA CCGATTGGGA ATTAGTTTTC GTAATGAATA AAGACGAAAT CATGTCGCAG GCCACCACAC TCGCCTGGTG GATGTCCGCC GTCGGTGCTG GCTTACTGGT GATTTTCGGC TTAGTCCTAG TCGCCATCTT CAAGATCCAA TTTAAAGACT TAGAACGCGT TGCCTTGGCA CTCAATGATA TTGCCGAAGG GGATGGTGAC CTGACGGTGA GAATTCACAC CGCCAACAGC CACGACGAGA TTGGCATCTT AGCTTCGGGC TTTAACCGCT TCGTCGAGCG TCTACACGGC ATGATCTCAA GAATGCACAA GATTGCGGGC CAACTGGAAT ATCAAGCCCA AGGCAGTAGC GCCTCGGCCA CAGATAATAG CCAGCGCATC GCCGTGCAGC AGGACGAAGT GACTATGGTT GCCACCGCAG TGACTGAAAT GGCGAGCGCC ACCGAAGAGA TTGCCAGCAA TGCCGAACAC ACAGCGCAAA CGGCGCAGGA TGCGGTAGGG TTGTCGAACC ACGGCCAAAA ACAAGTGATG CAAAGTCAGC AATCAATCCG CAACTTAGCC AATGAGGTCG AAACTGCGGG TCGTATTATC AGCGAGTTGA ACGAACACTC GCAGAAAATT AATAGCATCC TGCTCACCAT CAGTGGCATT GCCGAACAAA CCAACTTACT GGCGCTGAAC GCCGCCATTG AAGCCGCCCG CGCTGGTGAA CAAGGTCGCG GCTTTGCTGT GGTGGCTGAC GAGGTGCGCG TGTTGTCGCA GCGTACTCAC TCCTCGACCC AAGAAATTCA AGCCATGATC GAAACCCTAC AACAAACTGC GGGTAAGGCG GTTAAATCTA TGACTCAAAG TCATGATATG GCTGAAACCA GTGTCGCCGA CGCTAATTCG GCCAGTGAGA GCCTGCTACA GATCAGCAAA GCCATTAATG AGATCTCGGA TATGGCGAGC CAAATTGCCA CGGCCGCAGA GGAGCAAACC TCGGTCACCA GCGAAATTAA CCGTAATACC GAATCGATTC GTGAGGTCTC TGAAAATCTC TCTATCGAAG CACAAAGCTC TATGGTTCAG GCGCAGGAAT TGGCTCACTT AGCCGCCTCG CTGCAACAGG AAGTCGGCCG CTTTAAGCTA TAA
|
Protein sequence | MRSTLKTRLL FSSLFAVLIT VAVLVSISSY FIRNNALENT QHEIDQLANT FAEGIGLWMQ DRKMAITSLK KTIEADPSVQ ITPYLLQAHN GMGFALTYFG DEQGNMYRQD PALNVANYDP RIRPWYMDAK AANAIVMTAP YVSATLKKQV VTIAEPVTVS GSLFGVAAAN LTIDQLTDAV QRLQVPGKGY TIMVDKTGLI ISHPKSQLNN EQLNKIDNSF TPSWLSQRAN ANTLEERELD GETQLIYVAA VPSTDWELVF VMNKDEIMSQ ATTLAWWMSA VGAGLLVIFG LVLVAIFKIQ FKDLERVALA LNDIAEGDGD LTVRIHTANS HDEIGILASG FNRFVERLHG MISRMHKIAG QLEYQAQGSS ASATDNSQRI AVQQDEVTMV ATAVTEMASA TEEIASNAEH TAQTAQDAVG LSNHGQKQVM QSQQSIRNLA NEVETAGRII SELNEHSQKI NSILLTISGI AEQTNLLALN AAIEAARAGE QGRGFAVVAD EVRVLSQRTH SSTQEIQAMI ETLQQTAGKA VKSMTQSHDM AETSVADANS ASESLLQISK AINEISDMAS QIATAAEEQT SVTSEINRNT ESIREVSENL SIEAQSSMVQ AQELAHLAAS LQQEVGRFKL
|
| |