Gene Shewana3_0895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0895 
Symbol 
ID4477106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1042753 
End bp1044645 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content50% 
IMG OID639725431 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_868539 
Protein GI117919347 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.174985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCAA CACTCAAAAC CCGCTTACTC TTTAGTAGTC TCTTCGCCGT TCTCATTACT 
GTCGCAGTGC TGGTAAGCAT TTCAAGTTAC TTCATTAGAA ATAATGCCTT AGAAAATACT
CAACATGAAA TTGATCAACT GGCGAACACC TTTGCCGAAG GTATTGGCCT GTGGATGCAA
GATAGAAAAA TGGCCATCAC TAGTCTTAAA AAGACCATAG AGGCCGATCC CAGTGTGCAG
ATCACCCCCT ATTTATTACA AGCCCATAAT GGTATGGGAT TCGCGCTGAC CTATTTTGGA
GATGAACAAG GCAACATGTA TCGCCAAGAT CCTGCGCTTA ACGTCGCTAA CTATGACCCC
AGAATTCGTC CTTGGTATAT GGATGCCAAA GCCGCCAATG CCATTGTGAT GACCGCGCCC
TATGTCAGCG CCACCTTAAA AAAACAAGTA GTGACCATTG CAGAACCTGT GACTGTCTCT
GGTAGTTTGT TCGGGGTTGC CGCAGCTAAC CTCACCATAG ACCAACTCAC AGATGCGGTG
CAGCGCCTTC AAGTGCCAGG CAAAGGCTAC ACCATCATGG TGGACAAGAC AGGGCTTATC
ATTAGCCATC CTAAAAGCCA GCTCAATAAC GAACAACTCA ATAAAATCGA TAACAGTTTT
ACCCCGAGCT GGTTATCTCA ACGTGCCAAC GCCAATACCT TAGAAGAGCG CGAACTCGAT
GGCGAGACCC AACTTATTTA TGTTGCGGCT GTACCATCCA CCGATTGGGA ATTAGTTTTC
GTAATGAATA AAGACGAAAT CATGTCGCAG GCCACCACAC TCGCCTGGTG GATGTCCGCC
GTCGGTGCTG GCTTACTGGT GATTTTCGGC TTAGTCCTAG TCGCCATCTT CAAGATCCAA
TTTAAAGACT TAGAACGCGT TGCCTTGGCA CTCAATGATA TTGCCGAAGG GGATGGTGAC
CTGACGGTGA GAATTCACAC CGCCAACAGC CACGACGAGA TTGGCATCTT AGCTTCGGGC
TTTAACCGCT TCGTCGAGCG TCTACACGGC ATGATCTCAA GAATGCACAA GATTGCGGGC
CAACTGGAAT ATCAAGCCCA AGGCAGTAGC GCCTCGGCCA CAGATAATAG CCAGCGCATC
GCCGTGCAGC AGGACGAAGT GACTATGGTT GCCACCGCAG TGACTGAAAT GGCGAGCGCC
ACCGAAGAGA TTGCCAGCAA TGCCGAACAC ACAGCGCAAA CGGCGCAGGA TGCGGTAGGG
TTGTCGAACC ACGGCCAAAA ACAAGTGATG CAAAGTCAGC AATCAATCCG CAACTTAGCC
AATGAGGTCG AAACTGCGGG TCGTATTATC AGCGAGTTGA ACGAACACTC GCAGAAAATT
AATAGCATCC TGCTCACCAT CAGTGGCATT GCCGAACAAA CCAACTTACT GGCGCTGAAC
GCCGCCATTG AAGCCGCCCG CGCTGGTGAA CAAGGTCGCG GCTTTGCTGT GGTGGCTGAC
GAGGTGCGCG TGTTGTCGCA GCGTACTCAC TCCTCGACCC AAGAAATTCA AGCCATGATC
GAAACCCTAC AACAAACTGC GGGTAAGGCG GTTAAATCTA TGACTCAAAG TCATGATATG
GCTGAAACCA GTGTCGCCGA CGCTAATTCG GCCAGTGAGA GCCTGCTACA GATCAGCAAA
GCCATTAATG AGATCTCGGA TATGGCGAGC CAAATTGCCA CGGCCGCAGA GGAGCAAACC
TCGGTCACCA GCGAAATTAA CCGTAATACC GAATCGATTC GTGAGGTCTC TGAAAATCTC
TCTATCGAAG CACAAAGCTC TATGGTTCAG GCGCAGGAAT TGGCTCACTT AGCCGCCTCG
CTGCAACAGG AAGTCGGCCG CTTTAAGCTA TAA
 
Protein sequence
MRSTLKTRLL FSSLFAVLIT VAVLVSISSY FIRNNALENT QHEIDQLANT FAEGIGLWMQ 
DRKMAITSLK KTIEADPSVQ ITPYLLQAHN GMGFALTYFG DEQGNMYRQD PALNVANYDP
RIRPWYMDAK AANAIVMTAP YVSATLKKQV VTIAEPVTVS GSLFGVAAAN LTIDQLTDAV
QRLQVPGKGY TIMVDKTGLI ISHPKSQLNN EQLNKIDNSF TPSWLSQRAN ANTLEERELD
GETQLIYVAA VPSTDWELVF VMNKDEIMSQ ATTLAWWMSA VGAGLLVIFG LVLVAIFKIQ
FKDLERVALA LNDIAEGDGD LTVRIHTANS HDEIGILASG FNRFVERLHG MISRMHKIAG
QLEYQAQGSS ASATDNSQRI AVQQDEVTMV ATAVTEMASA TEEIASNAEH TAQTAQDAVG
LSNHGQKQVM QSQQSIRNLA NEVETAGRII SELNEHSQKI NSILLTISGI AEQTNLLALN
AAIEAARAGE QGRGFAVVAD EVRVLSQRTH SSTQEIQAMI ETLQQTAGKA VKSMTQSHDM
AETSVADANS ASESLLQISK AINEISDMAS QIATAAEEQT SVTSEINRNT ESIREVSENL
SIEAQSSMVQ AQELAHLAAS LQQEVGRFKL