Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0881 |
Symbol | |
ID | 4477092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1027477 |
End bp | 1028157 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639725417 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_868525 |
Protein GI | 117919333 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0298379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.326214 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGAAG CAATCAATAC TTCGCTGTTT AGCCCGATTG GCGACGACGG CATGATAGGC ATACTGCTGA TCCTAAACGG CTTAAAAGTC ACCTTGATTG TGACCTTCTT CGCCATGTTA TTAGGCGCAG TATTAGGCGT GGGTACCACA CTGATGAAGA TGTCATCAAA GTGGTATATC CGCTTCCCCG CCGAGCTTTA TGTTGGCGTG ATCCGCGGTA CGCCAGTGGT GGTGCAGTTA GTGATCCTTT ACTTCATCGT GCTGGCCGCA TTCGATGTCG ATAAGGTCAC CGCTGCCATC ATCGCCTTTG GTTTAAACAG CGGCGCTTAT ATCTCTGAGA TTATTCGCGC AGGAATTCAA GCCGTTGATA AAGGTCAAAC CGAAGCGGCA CGCTCACTCG GCCTGTCGCA GGCGATGACC ATGAAGCTAA TTATTCTGCC GCAGGCGATT AAGAATATTC TGCCCGCGTT AGGTAATGAG TTTATCGTGC TACTCAAAGA AACCGCCGTA ATTGGCTTTA TTGGCGGCGT GGATTTAATG CGGGCGGGTG AGATTATTCG CAGCCGTACT TTTGAAGACA GTATCCCACT CTTTACCTGT GCACTGATTT ACCTGTTCCT GACCTACAGC TTCACATTTA TGCTGTCGAA ATTCGAAAAG AGGTTGAAGC AAAGTGATTA A
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Protein sequence | MLEAINTSLF SPIGDDGMIG ILLILNGLKV TLIVTFFAML LGAVLGVGTT LMKMSSKWYI RFPAELYVGV IRGTPVVVQL VILYFIVLAA FDVDKVTAAI IAFGLNSGAY ISEIIRAGIQ AVDKGQTEAA RSLGLSQAMT MKLIILPQAI KNILPALGNE FIVLLKETAV IGFIGGVDLM RAGEIIRSRT FEDSIPLFTC ALIYLFLTYS FTFMLSKFEK RLKQSD
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