Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0845 |
Symbol | |
ID | 4477056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 978827 |
End bp | 980383 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639725381 |
Product | anaerobic nitric oxide reductase transcription regulator |
Protein accession | YP_868489 |
Protein GI | 117919297 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000422276 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCTTA GTCAAACCGA CCTTACCCGC ATCGCACTGG ACATCACCTC TGGTTTAGCC CACAGGGACC GCTTCTCACG CTTGCTCGAC ACGGTAAGAG CTAACCTGCA CTGTGATGCG GCGGCGTTAC TCACCTTCCA TGGACACTAT TTTACCCCAC TGGCCATCGA CGGTTTGAAC GAGGATGTGC TCGGCAGACG CTTTATCCTG AATGAGCATC CAAGGCTTGA AGCCATTGCC CGTGCGGGGG ATATAGTGCG CTTTCCCGCC GACAGTGAAC TTGCCGATCC CTACGATGGC TTGATCCCCA ATCAAACCGG GGCATTGAAG GTTCATGCCT GTATCGGACT CCCCTTATTT GCCGACGAAC AGCTTATCGG TGCCGTGACC ATCGATGCCT TTAATTCCCT GCAGTTCGAT CAATTCAGTA ATACCGAACT TCGCAGCTTA AGTGCGATTG CCGCCGCATC CTTAAGCAAC GCCCTGCTGG TTGAAAAACT GGAGCGCATG GCACTCAATA GCCACTCAAG CCATGTGCAG GAAAAGAGCC CGAACCTTAA CCACGATGCC GAAATCATCG GTAACTCGTC CCAGATGCAA AGCTTGAATC GGGAGATTGA AGTCGTTGCC CATAGCGACC TTAACGTACT GATTTTAGGC GAGACAGGAA CGGGCAAAGA ATTAGTCGCC CAGTCAATCC ATCAAAAATC CGCGAGATCT CACAAACCCT TGGTCTATCT CAATTGCGCG GCGCTTCCTG AATCGGTTGC CGAAAGCGAA CTCTTTGGCC ATATCAAAGG CGCGTTCACC GGCGCCATCA GCCATCGCAG TGGCAAGTTT GAAATGGCCG ATAAGGGCAC ACTCTTTCTC GATGAGATTG GCGAGCTTCC GCTCACGCTT CAGGCCAAGT TGCTGCGGGT CTTACAATAT GGCGACATTC AGAAAGTGGG GGATGATCGC AGCCTTAAAG TCGATGTGCG TATCATTGCT GCCACCAATA AGGATCTGAA AACGGAAGTG CTGGCTGGCC GTTTTAGGGC CGATCTTTAC CATAGGTTGA GCGTGTTTCC CCTGCTGGTG CCTCCACTGC GCGAGCGCGA GCAGGACATC ACCTTGTTGA GCGGATTCTT TGCCGAGCGA TATCGGCAAA AGCTTGGGAT GAAACAGCTT AATTTCAGTC CCAGTAGCTT AATCTTGCTC AATCAATATA CCTGGCCGGG CAATGTGCGC GAGCTCGAGC ACGCCATTCA CAGGGCGACC GTACTGGCGC GAGTCTCGGC ACAGGATGGC TGCTGCACCA TAGCGCCACA ACATTTTGAT TTACCGTTTA AACAAAGTCC TTTAGAAACA AACGCATCGA CAAGTTTAAG CGTAAACGAT ATGCAGCTTC GCCCGTTGGA AGGAGCCAGT TTAGCCCAAG CGACCGACGC CTTTCAGCGT GACTTCATTA AACAAGTGCT CACGGCACAA AACGGCAATT GGGCCGCCTC GGCCAGAGTC TTAGGACTCG ACCCGGGCAA TCTGCATCGC CTCGCAAAAC GCTTAAGGCT AAAATAA
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Protein sequence | MALSQTDLTR IALDITSGLA HRDRFSRLLD TVRANLHCDA AALLTFHGHY FTPLAIDGLN EDVLGRRFIL NEHPRLEAIA RAGDIVRFPA DSELADPYDG LIPNQTGALK VHACIGLPLF ADEQLIGAVT IDAFNSLQFD QFSNTELRSL SAIAAASLSN ALLVEKLERM ALNSHSSHVQ EKSPNLNHDA EIIGNSSQMQ SLNREIEVVA HSDLNVLILG ETGTGKELVA QSIHQKSARS HKPLVYLNCA ALPESVAESE LFGHIKGAFT GAISHRSGKF EMADKGTLFL DEIGELPLTL QAKLLRVLQY GDIQKVGDDR SLKVDVRIIA ATNKDLKTEV LAGRFRADLY HRLSVFPLLV PPLREREQDI TLLSGFFAER YRQKLGMKQL NFSPSSLILL NQYTWPGNVR ELEHAIHRAT VLARVSAQDG CCTIAPQHFD LPFKQSPLET NASTSLSVND MQLRPLEGAS LAQATDAFQR DFIKQVLTAQ NGNWAASARV LGLDPGNLHR LAKRLRLK
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