Gene Shewana3_0819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0819 
Symbol 
ID4477030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp947610 
End bp950804 
Gene Length3195 bp 
Protein Length1064 aa 
Translation table11 
GC content51% 
IMG OID639725355 
Productbifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 
Protein accessionYP_868463 
Protein GI117919271 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase 
TIGRFAM ID[TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000319641 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.250381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCGA TTACTATGTT CAAAGCGAGT GAAGTGCTGG CAGGCCGCTA CGATTCTGCC 
AATCTCGACG AACTGTTCAA AGCCGTCACC GACAACTACA TTGTCGATGA AGAACAATAC
TTGTCAGAGC TAATCAAACT AGTGCCCTCC AGTGATGAAG CCATCGAGCG CGTCACTCGT
CGTGCCCACG AACTGGTCAA CAAAGTTCGT CAATTCGATA AGAAAGGTTT AATGGTTGGC
ATCGACGCCT TCCTGCAGCA ATACAGCTTA GAAACACAGG AAGGGATTAT CCTGATGTGT
TTAGCCGAAG CCCTGCTGCG TATTCCCGAT GCGGCCACCG CCGACGCCTT GATTGAAGAT
AAACTCTCAG GCGCAAAATG GGATGAACAC TTAAGCAAGA GCGATTCGGT ACTGGTTAAC
GCCTCCACTT GGGGCTTAAT GCTCACTGGC AAAATCGTCA AACTCGATAA AAAAATCGAT
GGTACGCCAA GCAACCTGTT AAGCCGTTTA GTAAACCGTT TAGGTGAGCC TGTGATCCGC
CAAGCCATGA TGGCGGCGAT GAAGATCATG GGTAAGCAGT TCGTTCTCGG TCGCACCATG
AAAGAAGCGC TCAAGAACAG TGAAGACAAG CGTAAATTAG GTTATACCCA CTCCTACGAT
ATGCTGGGTG AAGCCGCGCT GACGCGTAAG GATGCCGAAA AATACTTTAA CGATTATGCC
AATGCGATTA CCGAGTTAGG CGCGCAAAGC TATAACGAAA ACGAATCTCC ACGCCCAACC
ATTTCGATCA AGCTGTCGGC ACTGCACCCA CGTTACGAAG TCGCTAACGA AGACCGTGTA
CTGACCGAGC TGTATGACAC AGTTATTCGC CTGATTAAGT TAGCCCGTGG CTTAAATATC
GGTATTTCTA TCGACGCCGA AGAAGTTGAC CGCCTCGAAC TGTCATTAAA ACTGTTCCAA
AAGCTGTTTA ACGCTGACGC CACTAAGGGT TGGGGCTTAC TCGGTATCGT AGTGCAAGCT
TACTCTAAGC GCGCCCTGCC TGTACTGGTA TGGTTAACCC GTCTAGCGAA AGAGCAAGGC
GACGAAATTC CGGTTCGCTT AGTGAAAGGC GCTTACTGGG ATAGTGAGCT GAAATGGGCA
CAACAAGCTG GCGAAGCCGC ATACCCACTC TACACCCGCA AAGCAGGTAC CGACGTATCT
TACTTAGCCT GTGCGCGTTA CCTGTTATCT GACGCCACCC GCGGCGCGAT TTACCCCCAA
TTTGCCAGCC ACAACGCGCA AACCGTTGCC GCGATTTCAG ATATGGCGGG CGATCGTAAC
CACGAGTTCC AACGCCTACA CGGCATGGGA CAAGAGCTGT ACGACACTAT TCTGTCGGAA
GCTGGCGCGA AAGCGGTACG TATCTACGCC CCAATCGGTG CCCATAAAGA TCTACTGCCC
TACTTAGTGC GTCGCCTACT GGAAAACGGT GCGAACACCT CGTTCGTACA CAAGCTGGTC
GATCCTAAAA CCCCTATCGA GTCTTTAGTG GTTCACCCAC TGAAAACCCT GACAGGCTAC
AAAACCCTGG CTAACAACAA AATCGTTTTA CCTACCGACA TCTTCGGTAG CGATCGCAAA
AATTCCAAGG GACTCAATAT GAACATCATT TCAGAAGCAG AGCCATTCTT CGCGGCCTTA
GACAAATTCA AATCGACGCA GTGGCAAGCG GGCCCTCTGG TTAATGGCCA AACCTTAACT
GGCGAGCACA AAACCGTGGT GAGCCCATTC GATACCACCC AAACTGTGGG TCAAGTGGCC
TTTGCTGACA AAGCGGCTAT CGAACAAGCT GTGGCCTCTG CCGATGCGGC GTTTGCAACT
TGGACTCGTA CTCCGGTTGA AGTACGCGCC TCAGCCCTGC AAAAGCTTGC GGACCTGTTA
GAAGAAAACC GCGAAGAACT GATTGCTCTG TGTACCCGTG AAGCGGGCAA GAGCATTCAA
GACGGTATCG ATGAAGTGCG TGAAGCCGTA GACTTCTGCC GCTACTACGC GGTGCAAGCT
AAGAAGCTGA TGTCAAAACC TGAACTGCTC CCTGGCCCAA CGGGTGAATT AAACGAACTC
TTCCTCCAAG GTCGCGGTGT GTTCGTCTGT ATCAGCCCAT GGAACTTCCC ATTGGCTATC
TTCCTAGGCC AAGTATCAGC AGCCCTCGCT GCGGGTAACA CTGTAGTAGC TAAACCTGCA
GAGCAAACCT CTATCATTGG TTACCGTGCA GTGCAGCTCG CACACCAAGC GGGTATTCCA
ACGGACGTGC TGCAATATCT ACCAGGCACA GGCGCTACCG TAGGTAACGC ACTGACGGCA
GATGAGCGCA TCGGCGGCGT ATGTTTTACC GGTTCAACGG GCACAGCCAA ACTCATCAAC
CGCACACTGG CCAACCGTGA AGGCGCAATT ATTCCATTAA TCGCCGAAAC TGGTGGTCAA
AACGCTATGG TGGTTGACTC TACTTCTCAG CCAGAACAAG TGGTTAACGA TGTAGTATCT
TCATCCTTCA CCAGCGCGGG TCAACGCTGC TCGGCGCTGC GTGTACTCTT CCTACAGGAA
GATATTGCTG ACCGCGTTAT CGACGTACTC CAAGGTGCGA TGGATGAGTT AGTGATTGGC
AACCCAAGTT CAGTGAAAAC CGACGTAGGC CCAGTTATCG ATGCGACCGC GAAGGCGAAC
CTTGACGCCC ATATCGACCA CATCAAGCAA GTGGGCAAGC TTATCAAGCA AATGTCCCTG
CCAGCGGGCA CTGAAAACGG TCACTTTGTG TCGCCAACTG CCGTTGAAAT CGACTCAATC
AAAGTGCTTG AAAAAGAACA CTTTGGTCCA ATCCTGCACG TAATCCGTTA CAAGGCATCT
GAACTTGCCC ATGTGATCGA TGAAATCAAC AGCACAGGCT TTGGCTTAAC CTTAGGTATC
CACAGCCGTA ACGAAGGCCA TGCCCTCGAA GTAGCTGACA AGGTTAACGT AGGTAACGTG
TACATCAACC GTAACCAAAT CGGCGCAGTC GTTGGCGTAC AGCCTTTCGG CGGCCAAGGT
CTGTCAGGCA CAGGTCCAAA AGCCGGTGGT CCACACTACT TAACTCGCTT CGTGACTGAA
AAGACACGCA CTAACAACAT CACCGCTATC GGTGGTAATG CGACCCTGTT GTCACTGGGT
GATAGCGACG CCTAA
 
Protein sequence
MEAITMFKAS EVLAGRYDSA NLDELFKAVT DNYIVDEEQY LSELIKLVPS SDEAIERVTR 
RAHELVNKVR QFDKKGLMVG IDAFLQQYSL ETQEGIILMC LAEALLRIPD AATADALIED
KLSGAKWDEH LSKSDSVLVN ASTWGLMLTG KIVKLDKKID GTPSNLLSRL VNRLGEPVIR
QAMMAAMKIM GKQFVLGRTM KEALKNSEDK RKLGYTHSYD MLGEAALTRK DAEKYFNDYA
NAITELGAQS YNENESPRPT ISIKLSALHP RYEVANEDRV LTELYDTVIR LIKLARGLNI
GISIDAEEVD RLELSLKLFQ KLFNADATKG WGLLGIVVQA YSKRALPVLV WLTRLAKEQG
DEIPVRLVKG AYWDSELKWA QQAGEAAYPL YTRKAGTDVS YLACARYLLS DATRGAIYPQ
FASHNAQTVA AISDMAGDRN HEFQRLHGMG QELYDTILSE AGAKAVRIYA PIGAHKDLLP
YLVRRLLENG ANTSFVHKLV DPKTPIESLV VHPLKTLTGY KTLANNKIVL PTDIFGSDRK
NSKGLNMNII SEAEPFFAAL DKFKSTQWQA GPLVNGQTLT GEHKTVVSPF DTTQTVGQVA
FADKAAIEQA VASADAAFAT WTRTPVEVRA SALQKLADLL EENREELIAL CTREAGKSIQ
DGIDEVREAV DFCRYYAVQA KKLMSKPELL PGPTGELNEL FLQGRGVFVC ISPWNFPLAI
FLGQVSAALA AGNTVVAKPA EQTSIIGYRA VQLAHQAGIP TDVLQYLPGT GATVGNALTA
DERIGGVCFT GSTGTAKLIN RTLANREGAI IPLIAETGGQ NAMVVDSTSQ PEQVVNDVVS
SSFTSAGQRC SALRVLFLQE DIADRVIDVL QGAMDELVIG NPSSVKTDVG PVIDATAKAN
LDAHIDHIKQ VGKLIKQMSL PAGTENGHFV SPTAVEIDSI KVLEKEHFGP ILHVIRYKAS
ELAHVIDEIN STGFGLTLGI HSRNEGHALE VADKVNVGNV YINRNQIGAV VGVQPFGGQG
LSGTGPKAGG PHYLTRFVTE KTRTNNITAI GGNATLLSLG DSDA