| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0810 |
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| Symbol | |
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| ID | 4477021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 935224 |
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| End bp | 936960 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639725346 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_868454 |
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| Protein GI | 117919262 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTT CCTCCCTAGG TTTATCTGCT CCAATCCAAA AAGCCGTGAC TGAACAAGGT
TATGACACAC CCTCGCCCAT TCAAGCACAG GCGATTCCCG CCGTACTGAC GGGTAAAGAC
GTGATGGCTG CGGCCCAAAC GGGGACAGGA AAAACCGCAG GCTTTACCCT GCCGTTGCTC
GAATTACTCT CTAAAGGCAA TAAAGCGAAG GCAGGACAAA TCCGCGCCCT AGTGCTCACC
CCCACGCGTG AGTTAGCGGC TCAAGTAAGC GAAAGTGTTG AAACCTATGG TAAATATCTG
CCATTACGCT CAGCGGTTGT CTTTGGTGGC GTGCCGATTA ATCCCCAAAT TCAAAAGCTA
CGCCATGGGG TAGATGTACT GGTCGCAACG CCAGGCCGAT TATTAGATCT AGAGCAGCAA
AAGGCGGTGA AGTTTAATCA ACTCGAAGTT TTAGTGCTGG ATGAAGCGGA TCGCATGCTC
GACATGGGTT TTATTCGCGA TATCAAAAAG ATCCTCGCCA TGTTGCCCGC TAAACGACAA
AACCTGATGT TTTCGGCGAC CTTCTCCGAT GAAATCCGCG AGCTCGCCAA AGGCCTAGTG
AATCAACCAG TAGAAATTTC AGTTACGCCA CGCAACGCCG CGGCAAACAC GGTCAAGCAA
TGGATTTGCC CCGTCGATAA GAATCAAAAA TCGGCGCTGC TTATTCAGCT CATCAAGCAG
GAAGACTGGC AGCAGGTACT AGTGTTTTCA CGCACTAAGC ACGGTGCCAA CAGACTGGCT
AAGAGTCTTA TTCAAGCCGA GATCAGCGCC GCCGCTATCC ACGGCAACAA GAGCCAAGGC
GCACGCACCA AAGCCTTAGC CGACTTTAAG AGTGGCGAAG TACGAGTACT CGTGGCGACC
GACATTGCGG CGCGCGGGCT CGATATCGAC CAATTACCAC AAGTGGTGAA CTTCGATCTG
CCCAATGTGC CCGAAGATTA CGTGCACCGC ATTGGCCGCA CCGGCCGTGC TGGCGCCTTA
GGCCAAGCCG TATCCTTAGT CAGTAGCGAA GAAACTAAGC TGCTCAGGGA TATTGAGCGT
TTGATCAATC GCGTGCTCGA AAGGCAGGAA GTTGAAGGCT TCAGCCCTGT CCATACGCTT
CCCGAATCGA CCCTAAATGC CCATGGTAAA GAGAACAAAA TCAAAGCCGT GGCGAGTCAA
CGTAAGCACC GCAGCGCAGG TAAACCCGCG CCAAGAGCCG GTTCGGGCCG CGATGGTCGT
AAAACACCGG CACCTAAAAC AGCTGACAAT GGCGACTTAG CACAGCAAAA GGGCCAAAAC
GCGCAGCCAA ACTCAAGTCA GCGTAACAAT CAAGGCCAGC GCAGTCATCA AGGTCAACGC
AACCAGCACC AAGAGCAACG CAATCACCAA GGCGAGTCTA AGCGTCCGCA AGCGGCAAAA
AACGCTGAGC ACAAGAATGC ACCTGCGACA GCCGAACAGG CCCGCTCGCC AAAACCGCAG
GATAAATATC CGCAACGTAG TAAAGGCCCT GCTAACTCAA GTAATAGCGA ACATAAGGCC
AATCGTGAGC ATAAAGCCAA AGGCCAGTCT CATTCAGGCT CGCAGCAACG CAGTCAAGAG
GCTCGCCATC ACGAAGGGTC TAGCGAAAAG ACAAACCAAG GGCTGCGTCG CCAAGGCAAG
CCACAGGGAC GAGTTCAACA GAGTACAAAC TCCGCAGCTA ATGCCCCGAA AAAGTAA
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| Protein sequence | MSFSSLGLSA PIQKAVTEQG YDTPSPIQAQ AIPAVLTGKD VMAAAQTGTG KTAGFTLPLL
ELLSKGNKAK AGQIRALVLT PTRELAAQVS ESVETYGKYL PLRSAVVFGG VPINPQIQKL
RHGVDVLVAT PGRLLDLEQQ KAVKFNQLEV LVLDEADRML DMGFIRDIKK ILAMLPAKRQ
NLMFSATFSD EIRELAKGLV NQPVEISVTP RNAAANTVKQ WICPVDKNQK SALLIQLIKQ
EDWQQVLVFS RTKHGANRLA KSLIQAEISA AAIHGNKSQG ARTKALADFK SGEVRVLVAT
DIAARGLDID QLPQVVNFDL PNVPEDYVHR IGRTGRAGAL GQAVSLVSSE ETKLLRDIER
LINRVLERQE VEGFSPVHTL PESTLNAHGK ENKIKAVASQ RKHRSAGKPA PRAGSGRDGR
KTPAPKTADN GDLAQQKGQN AQPNSSQRNN QGQRSHQGQR NQHQEQRNHQ GESKRPQAAK
NAEHKNAPAT AEQARSPKPQ DKYPQRSKGP ANSSNSEHKA NREHKAKGQS HSGSQQRSQE
ARHHEGSSEK TNQGLRRQGK PQGRVQQSTN SAANAPKK
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