Gene Shewana3_0792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0792 
Symbol 
ID4477003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp913115 
End bp913774 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content51% 
IMG OID639725328 
Productaromatic acid decarboxylase 
Protein accessionYP_868436 
Protein GI117919244 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTACG CCAAATCTGA GAAAGCCATT AGCTTAGCCT GGACGGGGGC CTCGGGCGCG 
CCCTATGGCT TGAAATTATT AGAATGTTTA TTAGCCTCGG GCTATCAAGT ATTTTTAATG
ATCTCGAGCG CCGCCCGTGT GGTGCTGGCC ACTGAGCATG GCTTGCAGCT CAGTGCGAAC
AGCGATAAAG CCAAGGCACA ACTGCTCGAG GTGCTGGCAC AGAAACAGAT AACCTTATCT
GGCGAGTTAG TGGTATTAGG CAAAGATGAG TGGTTTTCGC CGCCAGCATC CGGCAGTGCT
GCACCCAAAC AAATGGTGAT TTGCCCTTGT TCGACGGGGA CACTGGCAGC TGTTGCCACT
GGCATGAGCA ATAATTTGCT CGAACGGGCG GCGGACGTGG TATTAAAAGA GCGCGGTCAG
CTGATCCTAG TTCCGCGTGA AACTCCATTT AATGCCATAC ACTTAGAGCA TATGTTAACT
CTGTCGCGCT TAGGTGCCAC TATTATGCCT GCGGCGCCGG GCTTTTATCA TAATCCCAAA
TCCGTAGAAG ATCTGGTAGA CTTCATGGTC GCTCGAATCC TCGATCATTT GGGCGTTGAC
CATGCATTAA CGAGTCGCTG GGGCTATGAC AAACACTCCC CCAATGACAT CGACAATTGA
 
Protein sequence
MAYAKSEKAI SLAWTGASGA PYGLKLLECL LASGYQVFLM ISSAARVVLA TEHGLQLSAN 
SDKAKAQLLE VLAQKQITLS GELVVLGKDE WFSPPASGSA APKQMVICPC STGTLAAVAT
GMSNNLLERA ADVVLKERGQ LILVPRETPF NAIHLEHMLT LSRLGATIMP AAPGFYHNPK
SVEDLVDFMV ARILDHLGVD HALTSRWGYD KHSPNDIDN