| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0777 |
|---|
| Symbol | |
|---|
| ID | 4476988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 898940 |
|---|
| End bp | 900499 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639725313 |
|---|
| Product | EAL domain-containing protein |
|---|
| Protein accession | YP_868421 |
|---|
| Protein GI | 117919229 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAACC GTTCAAATCT TATCCAAACG TCGATGCGTA ACTTTGCCTC TCTCTTCGAA
TTACTCCTAA AAAAGTGGTT GTTCTTACTG CTGTTACCCG TCGTATTAGC TTTTGTTTTT
AGCTATTTTA TCGCAGTTTA TCTGGCACAT AACAAGGCGA CTGAGATTGG CGAGTTCAAC
CTAGAGCGTT TAGAGGCCAT CTTAAAACTG TCCGATCAGA TAGGTGAATA TGCCATGAAC
CTAACCGAAG AGGATTGTGG CAAGTTAACT GAATACATGC GTTTTCGGCC TTATTTTCGG
GGCGTGTTAC TTTTCAATGA CAAGTCATTT TACTGCTCCT CGACAACCGG GGACCTCAAT
TTACCCCTAA ATACTCTGCT GCCAGTTGAT AGACTCAAAG ATGGTTCGCA ACATATAGTG
CCGGAAACGC CAGCGCGGCC AGGCGTGCCA GCCATTATCA CCACTTTTAA GAATGAACAA
ACGCAATACG GCGCGGTTGT GGTATTCGAA GGCCAATACC TGATTGATAG CTTTATTCAA
CCCGATGTAT TTCCCCGCGC GGTAAAAACC GTTGTCTTAG GTTTGCATGG TGCGACCTTG
CCAGCGGCGC CACAGTTTAG CGGTAATGAA GTGATTACTG TGTTTGCTGG GGATAAATTT
GAGGTCCACC AAGATTTCGT TATCCTGCTG GAGATCTCTA AGGCGCTGTT TTGGCACTTT
TATTGGATTG CCTTTGGCCT GTTATTACCG TTGATTTTCA CCTTGTTCGT TTTATCTAGC
CTACTGTTCT GGAAGCGTAA TGGGCGTCAT TCGCTAGCCG ATGACATAAA AAGTGGTATC
GAGAACCAAG AGTTTTTCTT GGTCTACCAA CCTGTTGTAA GTAGTGAAGA CGGTAAGGCC
AAAGGTGTCG AGGCGTTAGT GCGTTGGCAG CATCCGCAAA TGGGCTTAGT TCGTCCCGAT
TTGTTTATTC CCATCGCCGA AGAAAGCCAA TTAATCGTGC CGTTGACCAA TTATATTTTT
GAACGCGCCT TGGCGGATTT TAGGCAATTG CAGTTAACCT CGGATTTCAG GATTGGCTTT
AACGTGGCGC CCGAGCATTT TATCCAAAGC GATATCGAGG CTAAGTTTCG TTACCTTAGG
GATGCGTTTG CCGAAATCGG CGTGCAGCCG CTAATCGAAA TCACCGAGCG GCAACTATTA
ACGGTGGATA TGTGTGAGCG AATTGCAGCG CTGCGTGAGC TGGGCATTCT CGTGGCGATT
GATGATTTCG GCACAGGGCA AACAACCTTG TCGCTGCTGC AAACCTTTAC GCTGGATTAC
CTTAAAATCG ATAAATGCTT TATCGATACC ATAGGCCAAG ATTCGGTGAC CTCCCATGTG
CTCGATACCA TCATCGAACT CTGTCATAAG ATGAATTATG TGGCCGTGGC CGAAGGCGTG
GAGACCCAAG AGCAGGCGGA CTATTTAATC AGTCGTGATG TGCATTTTTT GCAGGGCTAT
TTATACGCTA AGCCGATGAA ATTAAATGAA CTGGAACTGT GGCTTAAGGA GCATAACTAG
|
|---|
| Protein sequence | MPNRSNLIQT SMRNFASLFE LLLKKWLFLL LLPVVLAFVF SYFIAVYLAH NKATEIGEFN
LERLEAILKL SDQIGEYAMN LTEEDCGKLT EYMRFRPYFR GVLLFNDKSF YCSSTTGDLN
LPLNTLLPVD RLKDGSQHIV PETPARPGVP AIITTFKNEQ TQYGAVVVFE GQYLIDSFIQ
PDVFPRAVKT VVLGLHGATL PAAPQFSGNE VITVFAGDKF EVHQDFVILL EISKALFWHF
YWIAFGLLLP LIFTLFVLSS LLFWKRNGRH SLADDIKSGI ENQEFFLVYQ PVVSSEDGKA
KGVEALVRWQ HPQMGLVRPD LFIPIAEESQ LIVPLTNYIF ERALADFRQL QLTSDFRIGF
NVAPEHFIQS DIEAKFRYLR DAFAEIGVQP LIEITERQLL TVDMCERIAA LRELGILVAI
DDFGTGQTTL SLLQTFTLDY LKIDKCFIDT IGQDSVTSHV LDTIIELCHK MNYVAVAEGV
ETQEQADYLI SRDVHFLQGY LYAKPMKLNE LELWLKEHN
|
|---|
| |