Gene Shewana3_0663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0663 
Symbol 
ID4476873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp784206 
End bp785063 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content51% 
IMG OID639725198 
Productprotein of unknown function RIO1 
Protein accessionYP_868307 
Protein GI117919115 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[T] Signal transduction mechanisms 
COG ID[COG1718] Serine/threonine protein kinase involved in cell cycle control 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.24041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.125481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTC CTAAACGAAT CCAACCTCTG GTTGATGAAG GGCTGGTTGA CGAAGTCATT 
AGCCAACTGA TGAGCGGTAA AGAGGCTACA GTGTACGTGG TACGCTGTGG TGAGGATATT
CGCTGCGCCA AGGTATATAA GGAAGCGGAG AAACGCAGTT TTAAGCAGGC GGTGGTTTAC
CAAGAGGGAC GTAAAGTCCG TAATAGCCGC CGCGCTAGGG CGATGGAGAA AGGCTCTAAG
TTTGGCCGCG AACAGATGGA AGAGGCTTGG CAGAGCGCCG AGGTCGATGC GCTGTTTCGT
TTAGCCGATG CGGGAGTCAG AGTGCCTACG CCCTTTGGCT GTTTCGATGG CGTATTGTTG
ATGGAACTCG TCACCGACAG CGAAGGCCAT GTTGCGCCCC GTTTGAATGA TGTGAGTTTC
AGTGCCGAGC AAGCCATCCA CGACCATGGG TTAGTGATGA CCTATGTTAA ACGTATGCTC
TGCGCAGGTT TAGTCCATGG CGACTTATCC GAATTTAACG TCCTAGTGGA TGCTAATGGC
CCGGTGATTA TCGATTTACC TCAGGCCGTC GATGCCGCAG CCAACAACCA TGCGAAATGG
ATGCTGGAGC GTGATGTTAA TAACATGACG CAATATTACG GTCAGTACGC CCCCGAGCTA
CTCAAGACCC AATATGCCAA AGAAATGTGG GCGCTGTTTG AGGCGGGACA ATTAAAAGCG
GATACGCCGC TCACGGGTAA ATTTACCGAA GTATTAGTCG ATGCCGATGT CAATTCTGTA
TTGGATGAAA TTCAAGCCGC CTATGATGAG GCGCAGGAGC GCAAGCTGCG ACTTCAAGAA
GCTAACGAAA ACTATTAG
 
Protein sequence
MKTPKRIQPL VDEGLVDEVI SQLMSGKEAT VYVVRCGEDI RCAKVYKEAE KRSFKQAVVY 
QEGRKVRNSR RARAMEKGSK FGREQMEEAW QSAEVDALFR LADAGVRVPT PFGCFDGVLL
MELVTDSEGH VAPRLNDVSF SAEQAIHDHG LVMTYVKRML CAGLVHGDLS EFNVLVDANG
PVIIDLPQAV DAAANNHAKW MLERDVNNMT QYYGQYAPEL LKTQYAKEMW ALFEAGQLKA
DTPLTGKFTE VLVDADVNSV LDEIQAAYDE AQERKLRLQE ANENY