Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0599 |
Symbol | |
ID | 4476634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 702512 |
End bp | 703657 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639725135 |
Product | HflK protein |
Protein accession | YP_868244 |
Protein GI | 117919052 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0263631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000131875 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCTTGGA ACGAGCCCGG TAACAAGGGT AATGATCCTT GGGGAAATAA AGGTGGTAAC GACAAAGGAC CACCAGACCT TGATGAGGTT TTTCGTAATC TTTCAAAACG CTTTGGCGGC AAAGGCAATG GCTCATCAGG CCAGAGCTTT AGTTCGTTCA GCTTAATCAT CATTCTTGCC ATCGCTTTTG TTGTTTGGGG ACTCTCGGGT TTTTACACCA TTAAAGAAGC TGAGCGTGGT GTTGCGCTGC GTTTTGGTCA GCACATTGGT GAGGTGGGAC CTGGTCTGCA TTGGAAGGCT ACGTTTATAG ACCAGATTTA TCCCGTTGAT GTGCAATCTG TTCGCTCCAT TCCTGCTTCT GGCAGCATGT TGACCTCAGA TGAAAACGTC GTGAAGGTCG AGCTGGACGT ACAGTATCGT ATTCTTGATG CGTATTCTTA TCTGTTCAGT GCCGTTGATG CGAATGCCAG CTTACGCGAA GCCACAGACA GTGCGCTGCG TTATGTTATC GGCCACAACA AGATGGACGA TATTCTGACC ACGGGTCGTG ATGCGATTCG TCGCGATACT TGGAAAGAAC TCGAGCGCAT CATTGAGCCG TACAAATTAG GCTTAGCCAT TGTTGACGTT AACTTTTTGC CTGCGCGTCC ACCTGAAGAA GTGAAAGATG CTTTCGACGA TGCGATTGCG GCACAAGAAG ACGAACAACG CTTTATCCGT GAAGCCGAAG CTTATGCCCG TGAAGTTGAG CCTAAAGCGC GCGGTGAAGT TGAGCGTATG GCGCAACAAG CGAATGCCTA TAAAGAGCGT GAAATTCTTG AAGCTCGCGG TAAAGTGGCT CGTTTCGAGT TACTGTTGCC TGAGTACCAA GCGGCACCTG AAGTGACCCG CAAGCGTTTG TATCTCGATG CAATGCAACA GGTGATGACA GATACCAACA AGGTACTGAT CGACGCGAAG AACAATGGCA ATTTAATGTA TTTGCCTTTA GACAAGTTAA TGAAAGAGAA GCCTGTGACT ACGCCAGAGG TTGAGCATAA GGCTCAGCAG AACGTCAATT CTTCATCTAT GTCAACGACT CGCATTGGTG AGCCTTTGAG TGGACGCCCT TCTCGCGAGG ACCGTGCTCG CCAAGGGAGG GAGTAA
|
Protein sequence | MAWNEPGNKG NDPWGNKGGN DKGPPDLDEV FRNLSKRFGG KGNGSSGQSF SSFSLIIILA IAFVVWGLSG FYTIKEAERG VALRFGQHIG EVGPGLHWKA TFIDQIYPVD VQSVRSIPAS GSMLTSDENV VKVELDVQYR ILDAYSYLFS AVDANASLRE ATDSALRYVI GHNKMDDILT TGRDAIRRDT WKELERIIEP YKLGLAIVDV NFLPARPPEE VKDAFDDAIA AQEDEQRFIR EAEAYAREVE PKARGEVERM AQQANAYKER EILEARGKVA RFELLLPEYQ AAPEVTRKRL YLDAMQQVMT DTNKVLIDAK NNGNLMYLPL DKLMKEKPVT TPEVEHKAQQ NVNSSSMSTT RIGEPLSGRP SREDRARQGR E
|
| |