Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0598 |
Symbol | |
ID | 4476633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 701168 |
End bp | 702475 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639725134 |
Product | GTP-binding protein, HSR1-related |
Protein accession | YP_868243 |
Protein GI | 117919051 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.472321 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000215533 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGTTTGATC GTTATGAGGC GGGAGAAACA GCGGTTCTTG TCCATATCGA CTTTTCCGAT GAGGAACGCC GGGAAGACTT AGTCGAGTTA CAGCTATTAG TCGAGTCAGC TGGAGCACGC TCAGTCGGGG TCATTACTGG AAGTCGACGC TCACCAGACC GTAAGTTTTT TATTGGTTCT GGTAAAGCCG AGGAGTTAGC TGCATTAGTG GCTGCGACCG AGGCGAATGT GGTTATTTTC AATCACGCCT TGAGTCCTGC TCAAGAGCGA AACCTTGAAC AGGTGTGTCA GTGCCGTGTA TTGGACCGAA CCACGCTGAT CTTGGATATT TTCGCTCAAC GTGCTCGGAC CCATGAAGGT AAGTTACAGG TGGAGCTAGC GCAATTGCGC CACATGTCGA CGCGTCTTGT GCGTGGTTGG ACTCACCTTG AGCGCCAAAA AGGTGGTATC GGTTTACGCG GTCCGGGTGA AACCCAGCTA GAAACCGATA GACGTTTGCT CAGGGGCCGT ATTAAAAATA TCAATAAACG CTTAGAGCGT GTTGATAAAC AACGTGAGCA GAGTCGCCGC GCCCGTAAGC GTAGTGACAT GCCAACAGTC TCATTAGTGG GTTATACCAA CGCGGGCAAG TCAACGCTGT TTAATGCCTT AACCTCATCT GATGTTTATG CAGCCGACCA GCTATTTGCC ACACTCGATC CCACATTGAG AAAGTTAGAT CTGCCCGACG GTGCCGTGAT TTTAGCGGAC ACTGTAGGTT TTATTCGCCA TTTACCACAC GATCTGGTTG CCGCGTTCAA GGCAACACTG CAGGAAACGC GTCAAGCGGA TTTATTGCTG CATATCGTTG ATTGTGCTGA TGAAAACATG GCGGATAACT TCGAGCAGGT GCAAAACGTG CTCGAAGATA TCGATGCAGC CGAAGTGATG CAGTTGGTCG TTTGTAATAA AATCGACCTG CTTGAGGATG TCACGCCGCG CATCGAATAC GATGAACACG GTAAGCCCGT GCGCGTCTGG CTTTCGGCAC AAAAACGTTT GGGATTTGAT CTGCTCCTGA AGGCAATCAC CGAGTTGATT GGTGAAGTCA TTCATGAGTT TACACTTAAG ATTCCGGCTA CTGCTGGACA TTATCTTGGC CAGTTTTATC GACTGGATGC GATACAGCAG AAAGAGTACG ACGATCTGGG GAACTGTATT TTGTCTGTTC GTTTATCGGA TGCCGATTGG CGCCGATTAG CTAAACAGAG TCAGGGTGAG TTAGAAACCT TTATCTTCGA TCCGTCGACA GAAAAGGCTG TTTGTTAA
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Protein sequence | MFDRYEAGET AVLVHIDFSD EERREDLVEL QLLVESAGAR SVGVITGSRR SPDRKFFIGS GKAEELAALV AATEANVVIF NHALSPAQER NLEQVCQCRV LDRTTLILDI FAQRARTHEG KLQVELAQLR HMSTRLVRGW THLERQKGGI GLRGPGETQL ETDRRLLRGR IKNINKRLER VDKQREQSRR ARKRSDMPTV SLVGYTNAGK STLFNALTSS DVYAADQLFA TLDPTLRKLD LPDGAVILAD TVGFIRHLPH DLVAAFKATL QETRQADLLL HIVDCADENM ADNFEQVQNV LEDIDAAEVM QLVVCNKIDL LEDVTPRIEY DEHGKPVRVW LSAQKRLGFD LLLKAITELI GEVIHEFTLK IPATAGHYLG QFYRLDAIQQ KEYDDLGNCI LSVRLSDADW RRLAKQSQGE LETFIFDPST EKAVC
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