| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0596 |
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| Symbol | miaA |
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| ID | 4476631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 699889 |
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| End bp | 700779 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639725132 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_868241 |
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| Protein GI | 117919049 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.888618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000261712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGGACCAA CGGCGTCCGG AAAAACCGCT TTAGCACTCG AATTAGCCGA AAAGCATAAT
TGCGAGATTA TCTCGGTTGA TTCAGCATTG ATCTATCGCG GGATGGACAT CGGCAGTGCT
AAACCCTCTG CCGAGGAATT AGCGCGAGGT CCACATCGAC TGATCGACAT CCGCGATCCG
GCAGAGAGCT ACTCCGCCGC CGATTTTAGA GCCGATGCGC TGCGCGAGAT TGAACAGATT
ATTAGCATGG GAAAGACCCC CGTATTAGTG GGCGGGACCA TGATGTACTT TAAGGCGCTT
TTAGAAGGAT TATCGCCGCT ACCGAGTGCC GATGAGGCGA TTCGGGCCGA GATCCAAGCC
GAAGCGGACG CAAACGGATG GGAAGCACTG CACGAGCAAT TAAGGGAGAT AGATCCCGTA
TCGGCAGAAA GAATTCATCC TAATGATCCA CAAAGGCTTT CAAGAGCGAT AGAAGTATAT
AGAATAAGCG GTAAGAGTCT GACCGAGTTA ACTCAAACCA AGTCGGCTCC TTTACCCTAC
GATGTGGTGC AATTTGCCAT TGCGCCCCGT GAGCGCAAAG TGCTGCATGA GTTAATCGGG
CAGCGTTTTC GGATAATGTT AGAGCAAGGT TTTATTGATG AAGTCGCCCA GCTGAAAGCG
AGAGGTGACC TACATTTAGA TTTGCCCTCA ATGCGTTGCG TGGGATATCG ACAATGTTGG
CAGTATCTCG ATGGTGAATT TGACTATGAT ACTATGGTCG AAAAAGCCGT TGCCGCTACT
AGGCAATTAG CCAAGCGTCA ATTAACATGG TTGCGTAGTT GGCCAGAGTT GAATTGGCTT
GAAAGTGGTG CTGAGGGGAA TTTAGTTACA CTTATGCGTC AATGCCGCTA G
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| Protein sequence | MGPTASGKTA LALELAEKHN CEIISVDSAL IYRGMDIGSA KPSAEELARG PHRLIDIRDP
AESYSAADFR ADALREIEQI ISMGKTPVLV GGTMMYFKAL LEGLSPLPSA DEAIRAEIQA
EADANGWEAL HEQLREIDPV SAERIHPNDP QRLSRAIEVY RISGKSLTEL TQTKSAPLPY
DVVQFAIAPR ERKVLHELIG QRFRIMLEQG FIDEVAQLKA RGDLHLDLPS MRCVGYRQCW
QYLDGEFDYD TMVEKAVAAT RQLAKRQLTW LRSWPELNWL ESGAEGNLVT LMRQCR
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