Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0594 |
Symbol | |
ID | 4476629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 696509 |
End bp | 697900 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639725130 |
Product | cell wall hydrolase/autolysin |
Protein accession | YP_868239 |
Protein GI | 117919047 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000169523 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000280884 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACTAAAA ATAAGCATTA CTTTCAGACT ATTACTCTTT TTCTGTGCGC TTTTTTTGCT GTAGCAGCTC ATGCTGCTAA CCAGCTTGAG GGCGTGCGTA TTTGGGCTGC CCCCGAGTCG ACCCGTGTGG TGTTCGATTT GAGTGAAGCG CCAAACTACA CTTATTTTTC CCTCGATGGG CCCAATCGTT TAGTGGTCGA CCTTAAAAAG GCGTCGACAA AACTGAGCCT GAAAAATATC GATAACAACA GTAAATTGGT TAAAGGGGTT CGCGTCAGCA AATCACCCAC TAAAGGTGAT TTACGTTTGG TGATCGATCT TGTTAAGCCA TTAAATGCTA ACTTGTTTTC CCTTCCCGAG ACGGCGCCCT ATGGTAATCG TTTGGTGGTG GATCTTGAGG ATAAAACCTT AACGACGGCA ACAGCTGTGG TGAGTTCGAC TCCCGTTAAA ACGGTTACTC AATCGGCGCA ATCCTCCCGT GATATTGTGG TAGCGATTGA TGCGGGCCAT GGTGGTGACG ATCCTGGTTC TATTGGCCCT TCAGGTGTTT ACGAGAAAAA AGTGGCACTG GAGATAGCAA AAAGAGTGGC CAGTAAGATC AACGACACGC CGGGTATGCG GGCAGTGATG ATCCGTACCG GCGATTACTT TGTGAATTTG AACAAGCGCT CCGAGCTCGC CCGTAACAGT AAGGCCGATT TACTGATTTC TATCCACGCC GATGCTTTTA CCTCGCCTCA GCCAAAAGGA GCGTCTGTGT GGGTATTGTC GATGCGCCGC GCGAACAGTG AAATTGGTCG TTGGTTAGAG CAAAAAGAGA AACACTCAGA ACTCTTAGGT GGTGCAGGGG AAATTATTCA AAATACCGAT AATGAACAGT ATCTTGCAAT GACTCTGCTC GACATGTCCA TGAACAGTTC GATGGCTATT GGTCACTCAG TTGCTGGGGA TATTCTCAAG GATCTCGGTT CAGTGACTGA GCTGCATAAG AGTCGCCCTG AGTCTGCGAG CCTTGCGGTA TTAAAATCCC CCGATATTCC CTCTATTCTG GTGGAGACAG GATTTATTTC GAATCCGAAG GAAGAAAGGT TACTTAATAG CAGTCGCCAT CAGGAAAGTA TCGCAACCGC TATCTATAAG GGCGTTAGCC GTTATTTCCA CAATAACCCG CCGGCAGATA CCTTGCTCGC GAAGCGTAAT AGCGGCGGCA CAACGGCCAG CTCGAGCGCG AAATCCTCCT CGGGAAATAT CAAGCACAAG GTGAGCCGCG GCGAGTCACT TTCGGCGATT GCTCAGCGTT ATCAAGTGCC TATGGCTAGC ATTAAGCGCG CCAATGGCAT GAAGACGGAT GTGGTACAAC TCGGGCAAAC ACTCGTTATT CCTGAGAGTT AA
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Protein sequence | MTKNKHYFQT ITLFLCAFFA VAAHAANQLE GVRIWAAPES TRVVFDLSEA PNYTYFSLDG PNRLVVDLKK ASTKLSLKNI DNNSKLVKGV RVSKSPTKGD LRLVIDLVKP LNANLFSLPE TAPYGNRLVV DLEDKTLTTA TAVVSSTPVK TVTQSAQSSR DIVVAIDAGH GGDDPGSIGP SGVYEKKVAL EIAKRVASKI NDTPGMRAVM IRTGDYFVNL NKRSELARNS KADLLISIHA DAFTSPQPKG ASVWVLSMRR ANSEIGRWLE QKEKHSELLG GAGEIIQNTD NEQYLAMTLL DMSMNSSMAI GHSVAGDILK DLGSVTELHK SRPESASLAV LKSPDIPSIL VETGFISNPK EERLLNSSRH QESIATAIYK GVSRYFHNNP PADTLLAKRN SGGTTASSSA KSSSGNIKHK VSRGESLSAI AQRYQVPMAS IKRANGMKTD VVQLGQTLVI PES
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