| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0586 |
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| Symbol | |
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| ID | 4476617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 685727 |
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| End bp | 688930 |
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| Gene Length | 3204 bp |
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| Protein Length | 1067 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639725118 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_868231 |
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| Protein GI | 117919039 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0875624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGTA TTTTATTGTT CGTTATTGCT TTTTTGTCTT TTTCTCTCCA TGCCAATTCG
CCACTGCAAT TGGACAAGCG CCTTGGCCTA AACAACCAAA ATCAGCAACA AAATATTAGC
ATTGACGATC AAATTGTTGA GCTTAAAAAC AACATCGACA GACTGGCAGC GAATGCGAAC
AGTTTTCAGC AGGCGCAGCT CGATTTTGAA GAAAACAAAA AGGTCATCGA CCACGGCTTA
AAAGAGGCCG CTAAGCCCTT AAAGCTGGAT AAAGCCACGG ATCTCAACCA GCAAGCCTCG
ATGGCTTATT TACGACTGTC GGAATTAAAA GAGAGCGAAA CCGCTTTAGG TAATCAAGTC
AGCGAACTGT TACAACGCCA CAATCTGCTG CCCTCCGTCA TCGCCAACGC TAGACAGAAT
GTGCTGCAAA ATAAGAAAAC CGAATTAGCC CCGCTGGACA CGCCAGCTGG CGAGTTACAG
CAAACGCAAC GGGTTTTCTT CGAGCAAAGC CTCGCCACCA ATGAGGCCGA ACTTGCCAGT
AGCCAAAAGC GCATCGAACT CACCCAGCTA CAGTTACAGT TGGTTCGCCA ACAATTAAGC
CAGCAAGAAG CCTTTATTGA AACCATCAAT AAGGCGATGA ATAAACAGCG TCAGCAACAA
ACCGATGCAA CCTTGGCGAA GAATTTAGTC GATACCGCCA AGGTCGTGGA TCCAGTGACC
CGTAACATTG CCGACACTAA CCAGATCTAC GGCCAAAAAC TCCAAACCTT AACCTTGCAA
ATCAACAACG TGGTTGAGCA GCAAGAGCAG GCCGAGCTGC AATATCAATC CCAGGCCAAA
CAGCTGGCGA ATATCCAAGA GCAAATCACT TGGGTCAAAA TGAACTCCGC CTTTGGCGAG
CGTTTTTTGC AGATGCTGCA ATCTCTGCCT AAGCCGCCAA ACCATGAGAA GCTGCAAACG
CTGATCGCCG ATGCTCGCCT CGATAGGTAC CACCTCGAGC AACAACAGGC ACTTAACGAG
CAAGAGTTAG AGCAGACCAA CCTCTACAAC GAGGGACAGA TTAAACTGCT ACGCTCACAA
CAGGCGCTGC TGACACAGTT GATGCAGAGT TATGACCAAT ATTTGAGTGA ACTAGGCAAA
CTCAAAGTCA ATTATCAGCA ACTAAGTCAG CAGCATCTGA CCTTAAAAAA CACCCTCAAC
GAGCACCTGT TTTGGGTGCC CAACGCCGCG AGCATAAACA AACTCTGGCT CACCGACTTG
CAGCGCAGCG CCCTGTGGTT AGTGCAAGAA GCGCAGTGGG GACAATTGGG TAAAGCCTGG
CAGGAGCAGA ATGACTATTG GTCATGGTGG ATCATTCTGC TAGTGCTCTG CTTAGTGATC
CAAGATTTAA TCCGGCCTAA GTTCAAACGC TTACTCACCC ACTATGTCAC CTACGTGGGT
AATGTGACGC AGGATAAATT TATCTACACC TTTAAATCCT TAGTCCTCAG CCTAGGTTAT
GCCCTGATCA AACCGCTACC CATAGTCGCG GCAGGGTGGA TTTTCTATCA ATCTGAACGT
AACTTTGTGC AGGCCGTCGG CATGGGAATT TTAGCAATAG GATTAGTTTA CCTATTGTAT
CGCTTGATTT TTATCCTCGC CCTCGACAAG GGGGTCTTAG TCGGTCACTT CAAACGCCCC
TCAAAACTCA TCCAAGCAGG TCAACTCAGG CTCAAACACT TTGTGTTTGT CGCCAGCCCG
CTGCTCGGCA TTATGGGCTT TACCGAAGTC CTCGACGCAT CCCTTATCCG CAATAGCATT
GGCCGCGGTG CATTTATCTG TTTTTGCGTG GTGTTATTCT TGTTATACAA GGATATCTTG
GTGCTAAGCC GCCAGAATAG CGACACCCAG AAAGACGGCA AAAACAAACG CCTTATTCAA
AAAATGCTCT GGGCATTGCT GATTTCAGTC CCACTGCTGA GTGCCGTACT GGCCTTTAGG
GGTTACTACT TCACCGCCTT CCAAATGCTG TTGCAGTTAC AACTGTCCAT CGTATTGGGA
TTAAGTTTCC TGCTGCTTTA TCAATTAATT AAACGTTGGA TGCTCATCGA GCGCCGCCGC
ATTGCCTTCG ATCGCGCCAA GGCCAAGCGG GCCGAACGGT TAGCGCAGCG GGAAAAGGGT
GAGACTCACC ATGTTTCTAG CGATGGCCTA GATACCTACG AAGAACCTGT CGTCGATCTT
GAAACTATTT CGAGCCAGTC CCTCGGCTTA GTGCGCTCCC TATTGCTATT GGCGTTTTTA
GCCAGCTTGA TTGGCCTGTG GACGCAAACC CATACGGCGC TATTTTCCTT CTTAGATGGC
ATCACCCTCT GGACGACAAA TACCAGCGTT AATGGTGTCG AGCAGCAGCT GCCTATCACC
ATGAAATCGC TGTTATTGGG CTTAGTCATC GTTGGTTTCT CACTGATGAT TGCGACCAAT
TTACCCGGTC TGCTCGAGCT GATGATTCTA CAACGGCTCG ATTTAACACC CGGCACCGGC
TTTGCCATCA CTACGGTAAG CCGTTATTTA GTGGTGTTTT TAGGCCTGCT GATTGGCTTT
TCGAATCTCG GGATGGAATG GTCAAAACTA CAATGGTTGA TTGCCGCCTT GTCACTGGGT
CTAGGTTTTG GTTTGCAGGA GATTTTTGCC AACTTTATCT CGGGCCTGAT TATTCTGTTC
GAAAAACCAG TGCGTATTGG CGATACAGTG ACGATCCGTG ACTTAACGGG AACCGTGAGT
AAAATCCAGA TCCGCGCCAC CACCATTATC GACTGGGACA GAAAGGAAAT TATCATTCCG
AACAAGGCCT TTATTACCGA GCAATTGATT AACTGGTCAC TGTCCGACCC CATCACGAGG
GTGATAGTGC ATGTGTCGGT TGCCCGCGAT TCTGATCCCG CCAAAGTCGA AGCAACGCTG
TATCAAGCGG TGCAGGAATG CGAAGATGCG CTGCCTAATC CAGAGCCTGA AGTCTGGTTT
GCGGGCTTTG GTAAACATAC CCAAGATTAC GAAGTGCGTG CCTATGCAAA AGAGATGTCG
GCCCGTTGGC CGCTGCGCCA CGACCTGCAT AAACGCATTA CCCGTAAGCT TAAAGAAAAC
AATTTAGAAC TCGCCTATCC GCAAATGGAA ATCCATCTTA AAAATGGCCA AACTCGCGAT
CAGGTCGGCA TAATCCGCAG TTAA
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| Protein sequence | MPRILLFVIA FLSFSLHANS PLQLDKRLGL NNQNQQQNIS IDDQIVELKN NIDRLAANAN
SFQQAQLDFE ENKKVIDHGL KEAAKPLKLD KATDLNQQAS MAYLRLSELK ESETALGNQV
SELLQRHNLL PSVIANARQN VLQNKKTELA PLDTPAGELQ QTQRVFFEQS LATNEAELAS
SQKRIELTQL QLQLVRQQLS QQEAFIETIN KAMNKQRQQQ TDATLAKNLV DTAKVVDPVT
RNIADTNQIY GQKLQTLTLQ INNVVEQQEQ AELQYQSQAK QLANIQEQIT WVKMNSAFGE
RFLQMLQSLP KPPNHEKLQT LIADARLDRY HLEQQQALNE QELEQTNLYN EGQIKLLRSQ
QALLTQLMQS YDQYLSELGK LKVNYQQLSQ QHLTLKNTLN EHLFWVPNAA SINKLWLTDL
QRSALWLVQE AQWGQLGKAW QEQNDYWSWW IILLVLCLVI QDLIRPKFKR LLTHYVTYVG
NVTQDKFIYT FKSLVLSLGY ALIKPLPIVA AGWIFYQSER NFVQAVGMGI LAIGLVYLLY
RLIFILALDK GVLVGHFKRP SKLIQAGQLR LKHFVFVASP LLGIMGFTEV LDASLIRNSI
GRGAFICFCV VLFLLYKDIL VLSRQNSDTQ KDGKNKRLIQ KMLWALLISV PLLSAVLAFR
GYYFTAFQML LQLQLSIVLG LSFLLLYQLI KRWMLIERRR IAFDRAKAKR AERLAQREKG
ETHHVSSDGL DTYEEPVVDL ETISSQSLGL VRSLLLLAFL ASLIGLWTQT HTALFSFLDG
ITLWTTNTSV NGVEQQLPIT MKSLLLGLVI VGFSLMIATN LPGLLELMIL QRLDLTPGTG
FAITTVSRYL VVFLGLLIGF SNLGMEWSKL QWLIAALSLG LGFGLQEIFA NFISGLIILF
EKPVRIGDTV TIRDLTGTVS KIQIRATTII DWDRKEIIIP NKAFITEQLI NWSLSDPITR
VIVHVSVARD SDPAKVEATL YQAVQECEDA LPNPEPEVWF AGFGKHTQDY EVRAYAKEMS
ARWPLRHDLH KRITRKLKEN NLELAYPQME IHLKNGQTRD QVGIIRS
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