| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0522 |
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| Symbol | |
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| ID | 4479713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 612889 |
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| End bp | 613944 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639725055 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_868168 |
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| Protein GI | 117918976 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.889598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAA GTAAACTCAT CATCGCCGTT CCACTATTGC TCGCCGCCGT TGCGGGTGGC
GGTTATTACT GGTGGACGCA AGTACGTTTT ATCGAAACCA CTGACAACGC CTATGTCGAG
GCCGATATCT CCCATGTGAG CGTGAAAGTC CCAGGTTATG TGGTGTTATC CGATGTGACC
GATAACCAAC ATGTGCGCAA GGGCGAGTTA TTAGCGCAAC TTGAAGATAA TCAGTTTAGC
GCTAAAGTCA GCCAAGCCGA GGCGTTACTC GCCAGTGCTA AGGCCGATAT GCAAACCTTA
GCCGCTAAGG TGGAATTGCA GCACGCGTTG ATCAGCCAAG CGAGTGCGGG CGTGGTGGCG
GCGCAGGCCG ACAAACTGCG TGCCGAGCAA CAGTTAAGCC GAGCTAAAAA GTTAAAAGTC
AGCAACTACA GCTCACAGGA CGATGTCGAC CAATTACAAG CAGGTTTTGA TTCCGCTGCC
GCTGGGCTAG ATGAAGCCAA GGCACTGTTA GTGGCTAAAG AGCGTGAGCT CGCTGTATTT
AATGCCCAGC TGAATCAGGC TGGTTCTGTG GTTGAACAGT CGAATGCGGC ATTGGAGCTG
GCTAAAATTC AGCTTAATGA TACCCGCGTG ACCGCGCCTT TCTCTGGGGT GATTGGTAAA
CGCGGCGCTA TGGTGGGGCA GTATGTACAG CCCGGCCAGG CACTCTACAG TTTGGTTCCG
GATGGGGCTG TGTGGATCAC GGCGAACTTT AAAGAAACCC AAATCCAACA TATGCAACCT
GGACAGTCGG TGCAGGTCAG TCTCGATGCG TTTCCCGACA AAACCTTTAC AGGTGTTATC
GATAGTCTGT CGCCGGCGTC CGGAGCCAAA TTTAGTCTGC TGCCCGCCGA AAATGCCACG
GGTAACTTCA CTAAAATCGT GCAACGTATC CCTGTGCGGA TCCGTTTAGA TCTCTCAGCA
GAAGAGGCGC GTGTCGTCCC CGGTTTAAGT GCTGTGGTCA AGGTCGATAC TGCGTCGCAT
CCGACGACAG CCATCGCTGC TAACGTCGGT CGCTAA
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| Protein sequence | MSKSKLIIAV PLLLAAVAGG GYYWWTQVRF IETTDNAYVE ADISHVSVKV PGYVVLSDVT
DNQHVRKGEL LAQLEDNQFS AKVSQAEALL ASAKADMQTL AAKVELQHAL ISQASAGVVA
AQADKLRAEQ QLSRAKKLKV SNYSSQDDVD QLQAGFDSAA AGLDEAKALL VAKERELAVF
NAQLNQAGSV VEQSNAALEL AKIQLNDTRV TAPFSGVIGK RGAMVGQYVQ PGQALYSLVP
DGAVWITANF KETQIQHMQP GQSVQVSLDA FPDKTFTGVI DSLSPASGAK FSLLPAENAT
GNFTKIVQRI PVRIRLDLSA EEARVVPGLS AVVKVDTASH PTTAIAANVG R
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