Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0482 |
Symbol | |
ID | 4476711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 564442 |
End bp | 566502 |
Gene Length | 2061 bp |
Protein Length | 686 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639725016 |
Product | peptidase S9 prolyl oligopeptidase |
Protein accession | YP_868129 |
Protein GI | 117918937 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAAAAT TTCCATTTAC GAGTCAGTTA TGCAGTGCTG CCATTGCCGC CGCACTGCTG CTGACGGGTT GCACTACGGC GGATGTTCGC AACGAACAGC CTCAAGTTGC CGCGACGCAG CAAACCGAGG CGCCGCTCAT TCCCATCGAA AACTTCTTTA ACGAGCAAAG TATTCGCCAT CTAAAAATGT CCGACGATGG CAAATGGCTC GCCTTTGTAA AGGAATACCA AGGGGCCAGC AATATCTATC TGATGGCGGA TAAGAGTGAC CTCGCTAGCG CCACGCCATT GACCACATCG GTAGAACCTA TCCGCGCCTT CGAATGGTCC GCCAAGGGCA ATGACTTATT CTTTATGAAG GACAAAGGCG GTAATGAGAA CACCCAGATT TACAAGCTGA GCTTTGAAGA ACACGCGGGT AAAATCACCG CCAAAGAGCA GCGCTTAACC CATAAGGACG ACGTGCAATA CAGCGTGCTC GAGCAGGTAA AAGACAATCC TGATTTACTG GTTGTTCAAG CCAACCACGA CGATTCGAGC CGCATGGATA TTTATCTGCT CAATATCAAC GATGGCAAGT TAACCCCAAT CCTGAAGAAC GAGCTGAGCT TTACTCAGGT GAAGTTTAAT AAACAGGGGC AACCTGTAAT TGCCAGCAGC AGTAATCTCG ATAACACCAA TGCCTTATAT GTACAGATCG ACGGCAACTG GCGCAAGATC ATTCAAAGTG CCAAGGGCGA GAGCATCGAT ATTCTAAAAG TGAACGATGA TAAGAAGCTC GCCTATATCA GCGCCAATAT CGGCGATCGC GATAAACAGG AATTGCTGAA AGTCGATCTG ATGACGGGTA AATATGAAAC CATTCACAGG GATCCCGACA ACGAGGCCGA CGTATTTGCG GTACAGTTTA GCGATGCGGG TGAGCCCTTG GCAGTTGGTT ACTACGGTGG ACGTTTACGG GTTTATCCCT TAGATGCCGA GTTTACCCGC CATTGGGATG TGATTAATCG TCATTTTAAT CAAGATGTTG AAATCACAAT TGGCGAGATG AACGAGAAAA CCAATCTGTG GCAAATTCAT GTCGCCAGCG ACAGAGCCGC AGGCGCTGAC TATCAATACA ATGCCGCCAC TGGGGATATC CATCTATTAG TGGACATTCC AGCCAGCATT CCTGCGGATC AACTCTCGCC ACGCCAATCT ATCGTGTATA CCGCGCGGGA TGGGGTGAAA ATCCAAGCCT ATTTAACGCT ACCGAAAGGT AAACAGACTC AGCTACCGAC CATTATCCTG CCCCATGGCG GCCCTTGGGC ACGGGATTTT TGGACACTCG ACTCGGGTTA TTTCCACGCG ATTGCCCAGT TCTATGCCAA CCGTGGTTAT GCCGTGTTGC AACCTAACTT CCGCGCCTCG ACGGGTTTTG GTAAGAAATT CTTAAACCTA GGTAACAATA ACTGGGGGAT TGGCAGCATG CAGCACGATC TCACCGACGG GGCCAATTAC TTAGTCGAAC AAGGTATTGC CGATAAACAA CGTTTAGGGA TCTTCGGCGC CTCCTACGGT GGTTATGCGG CACTGTCTGG TGCGACCTTT ACACCTGACT TGTACCAAGC GGTGATCGCT TACGTGGGGC CATCGAGCCT AGTGACGCTG ATGAATTCCT TCCCCGACTA CTGGCGCCCC TACTTAGGCC AATGGTTTGA GTCGGTGGGC GATCCGCAAA TTGCCGAGCA GAAGCAAGAT ATGGAAAAGC GCTCGCCAAT TAACTATGTC GATAATATCA AGGCGCCATT GATGCTGATC CAAGGGGCGA ACGATCCACG CGTCACCCAA ATTGAGTCGG ATAATATCGC CAAGAAGATG TATCAAAAGT CTTTGCCCGT TAAGTACGTA CTAGCAAAAG ATGAAGGACA TGGCTTTAGT AAACGTGCCA ACAAACTGGC ATCGATTGTC GCCACCGAAC AGTTTTTTGC TGAGCATTTA GGCGGGCGTG TCGATACGAA TGTGAACCCC GACATTCTAA AACACTTAGA CAGCCTGAAC GTCGATATCA GTAAACTCTA A
|
Protein sequence | MQKFPFTSQL CSAAIAAALL LTGCTTADVR NEQPQVAATQ QTEAPLIPIE NFFNEQSIRH LKMSDDGKWL AFVKEYQGAS NIYLMADKSD LASATPLTTS VEPIRAFEWS AKGNDLFFMK DKGGNENTQI YKLSFEEHAG KITAKEQRLT HKDDVQYSVL EQVKDNPDLL VVQANHDDSS RMDIYLLNIN DGKLTPILKN ELSFTQVKFN KQGQPVIASS SNLDNTNALY VQIDGNWRKI IQSAKGESID ILKVNDDKKL AYISANIGDR DKQELLKVDL MTGKYETIHR DPDNEADVFA VQFSDAGEPL AVGYYGGRLR VYPLDAEFTR HWDVINRHFN QDVEITIGEM NEKTNLWQIH VASDRAAGAD YQYNAATGDI HLLVDIPASI PADQLSPRQS IVYTARDGVK IQAYLTLPKG KQTQLPTIIL PHGGPWARDF WTLDSGYFHA IAQFYANRGY AVLQPNFRAS TGFGKKFLNL GNNNWGIGSM QHDLTDGANY LVEQGIADKQ RLGIFGASYG GYAALSGATF TPDLYQAVIA YVGPSSLVTL MNSFPDYWRP YLGQWFESVG DPQIAEQKQD MEKRSPINYV DNIKAPLMLI QGANDPRVTQ IESDNIAKKM YQKSLPVKYV LAKDEGHGFS KRANKLASIV ATEQFFAEHL GGRVDTNVNP DILKHLDSLN VDISKL
|
| |