Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0437 |
Symbol | |
ID | 4479344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 509792 |
End bp | 510595 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639724973 |
Product | short chain dehydrogenase |
Protein accession | YP_868086 |
Protein GI | 117918894 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGGAC TGACGGGGAA AGTAGTCATT ATTACGGGCG CTTCGGAAGG TATTGGCCGC GCGCTGGCGA TCGCTATGGC ACGGGTGGGT TGCCAACTGG TGCTCAGTGC CCGCAATGAA ACACGTTTAG CCTCCCTCGC CCTCGAAATC GCGAACTATG GTCCGACTCC CTTTGTGTTT GCCGCCGATG TCAGTAGCGC CTCCCAATGT GAAGCCTTAA TTCAAGCCAC TATTGCTCAT TATGGCCGCC TTGATATTCT CGTAAATAAC GCGGGTATGA CCATGTGGTC GCGTTTCGAT GAGCTCAATC AGTTGTCTGT GCTCGAAGAT ATCATGCGAG TCAACTATTT AGGCCCAGCG TATTTAACTC ACGCCGCCTT ACCCTATTTA AAGTCGAGCC AAGGTCAGGT GGTGGTGGTC GCTTCTGTGG CAGGGTTAAC GGGCGTGCCG ACACGCAGTG GCTATGCCGC CTCTAAACAC GCGGTTATCG GCTTTTTTGA TTCACTGCGG ATTGAGCTGG CGGATGATAA TGTCGCCGTG ACTGTGATTT GTCCCGATTT TGTCGTATCA CAGATTCATA AGCGTGCCCT CAATGGTGAG GGTAAGCCCC TTGGTAAATC CCCGATGCAG GAAGCCAAAA TTATCACCGC CGAGCAATGT GCGAACATGA TGCTCCCTGT GATCGCGACC CGAGGTCGGC AGCTTATTAC GTCGCTGCGT GGTCGACTCG GGCGCTGGCT AAAGCTGATT GCACCGGGTT TAATCGATAA AATCGCCCGC AAGGCGATTG CGTCGGGCCA TTGA
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Protein sequence | MDGLTGKVVI ITGASEGIGR ALAIAMARVG CQLVLSARNE TRLASLALEI ANYGPTPFVF AADVSSASQC EALIQATIAH YGRLDILVNN AGMTMWSRFD ELNQLSVLED IMRVNYLGPA YLTHAALPYL KSSQGQVVVV ASVAGLTGVP TRSGYAASKH AVIGFFDSLR IELADDNVAV TVICPDFVVS QIHKRALNGE GKPLGKSPMQ EAKIITAEQC ANMMLPVIAT RGRQLITSLR GRLGRWLKLI APGLIDKIAR KAIASGH
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