Gene Shewana3_0437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0437 
Symbol 
ID4479344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp509792 
End bp510595 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content54% 
IMG OID639724973 
Productshort chain dehydrogenase 
Protein accessionYP_868086 
Protein GI117918894 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGAC TGACGGGGAA AGTAGTCATT ATTACGGGCG CTTCGGAAGG TATTGGCCGC 
GCGCTGGCGA TCGCTATGGC ACGGGTGGGT TGCCAACTGG TGCTCAGTGC CCGCAATGAA
ACACGTTTAG CCTCCCTCGC CCTCGAAATC GCGAACTATG GTCCGACTCC CTTTGTGTTT
GCCGCCGATG TCAGTAGCGC CTCCCAATGT GAAGCCTTAA TTCAAGCCAC TATTGCTCAT
TATGGCCGCC TTGATATTCT CGTAAATAAC GCGGGTATGA CCATGTGGTC GCGTTTCGAT
GAGCTCAATC AGTTGTCTGT GCTCGAAGAT ATCATGCGAG TCAACTATTT AGGCCCAGCG
TATTTAACTC ACGCCGCCTT ACCCTATTTA AAGTCGAGCC AAGGTCAGGT GGTGGTGGTC
GCTTCTGTGG CAGGGTTAAC GGGCGTGCCG ACACGCAGTG GCTATGCCGC CTCTAAACAC
GCGGTTATCG GCTTTTTTGA TTCACTGCGG ATTGAGCTGG CGGATGATAA TGTCGCCGTG
ACTGTGATTT GTCCCGATTT TGTCGTATCA CAGATTCATA AGCGTGCCCT CAATGGTGAG
GGTAAGCCCC TTGGTAAATC CCCGATGCAG GAAGCCAAAA TTATCACCGC CGAGCAATGT
GCGAACATGA TGCTCCCTGT GATCGCGACC CGAGGTCGGC AGCTTATTAC GTCGCTGCGT
GGTCGACTCG GGCGCTGGCT AAAGCTGATT GCACCGGGTT TAATCGATAA AATCGCCCGC
AAGGCGATTG CGTCGGGCCA TTGA
 
Protein sequence
MDGLTGKVVI ITGASEGIGR ALAIAMARVG CQLVLSARNE TRLASLALEI ANYGPTPFVF 
AADVSSASQC EALIQATIAH YGRLDILVNN AGMTMWSRFD ELNQLSVLED IMRVNYLGPA
YLTHAALPYL KSSQGQVVVV ASVAGLTGVP TRSGYAASKH AVIGFFDSLR IELADDNVAV
TVICPDFVVS QIHKRALNGE GKPLGKSPMQ EAKIITAEQC ANMMLPVIAT RGRQLITSLR
GRLGRWLKLI APGLIDKIAR KAIASGH