| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0426 |
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| Symbol | aceE |
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| ID | 4479333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 485256 |
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| End bp | 487922 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639724962 |
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| Product | pyruvate dehydrogenase subunit E1 |
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| Protein accession | YP_868075 |
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| Protein GI | 117918883 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.373094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0838359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAG ATATGCTACA AGACTTAGAT CCGTTAGAGA CTCAGGAATG GGTTGACGCC
CTGCAAGCTG TATTAGAACA GGAAGGCCCT GAACGCGCCC ATTTCTTATT AGAGAAACTG
ATCGATAAAG CCCGTCGCAA TGGCACGCAC TTGCCTTACA CTGCGACCAC GGCCTATTTG
AACACCATTC CAGCGGGTCA AGAGCCGCAC ATGCCAGGCA ACCAAGAGAT GGAACGTCGC
ATTCGCGCTA TCATCCGTTG GAACGCCTTA GCTATGGTGC TGCGTGGTTC TAAGAAAGAT
TTAGAGTTAG GCGGCCATAT TTCGAGTTTC GCGTCGAGCG CAACCATTTA TGACGTATGC
TTCAACCACT TCTTCCGCGC GCCAAACGAG AAAGACGGCG GCGACTTAGT GTATTTCCAA
GGCCATATCG CCCCAGGTAT CTACGCGCGT TCATTCTTGG AAGGTCGTTT AACTGAAGAC
CAACTGGCTA ACTTCCGTCA AGAAGTGGAT GGCAAAGGTT TATCTTCTTA TCCGCACCCT
AAGTTGATGC CTGACTACTG GCAATTCCCA ACGGTTTCTA TGGGTCTGGG TCCAATCCAA
GCGATTTACC AAGCTCGCTT CTTAAAGTAC CTGACTGACC GTGGTCTGAA AGATTGTTCT
GAGCAAACCG TATACTGCTT CTTAGGTGAC GGTGAGTGTG ACGAGCCAGA AGCCTTAGGT
GCGATTGGTT TAGCTGCCCG TGAAGAATTA GATAACTTAG TCTTTATCAT CAACTGTAAC
CTGCAACGTC TGGACGGCCC AGTACGCGGT AACGGTAAGA TCATCCAAGA ACTGGAAGGT
GAATTCCGCG GCGCTGGCTG GGAAGTCGTG AAAGTGATTT GGGGTCGTTA CTGGGATCCA
TTATTGGCCC GTGATACCAG TGGTAAGTTA CTGCAGTTAA TGGAAGAAAC CGTTGACGGT
GAATACCAAA ACTGTAAAGC CAAAGGTGGC GCTTATACTC GCGAACACTT CTTCGGCAAA
TACCCAGAAA CCGCCGAAAT GGTGGCGAAC ATGTCAGATG ATGACATTTG GCGCTTAAAC
CGTGGTGGTC ATGACCCAGT TAAAGTGTAC GCGGCATTAG ACCATGCACG TAAGACTAAA
GGTCGCCCAA CGGTGATCCT GGCGAAAACC GTTAAAGGTT ACGGCCTAGG TGATGCGGGT
GAAGGTAAGA ACATCGCCCA CAACGTGAAG AAAATGGGTA TCGAGTCTAT CCGTTACTTC
CGCGATCGTT TCAATATCCC CATTCCAGAC GATCAATTAG AAGATCTGCC GTTCTACCAC
CCAGGTCCAG ATTCGGAAGA AGTGAAGTAC ATGATGAGCC GTCGTGCCGC ACTACATGGT
AGCGTGCCAC AACGTCGTCA GAAGTTCAGC GAAGAGCTGG AAATTCCTTC ACTGAAGATT
TTCGACTCGA TTTTGCAGGG TTCTAACGGC CGTGAAATTT CGTCAACGAT GGCGTTTGTT
CGCGTACTGA CTGCACTGTT AAAAGACAAG AAAATTGGCA AAAACATCGT GCCAATTATT
CCTGACGAAG CGCGTACCTT CGGTATGGAA GGCCTGTTCC GTCAAGTGGG TATTTATGCT
CACGAAGGCC AAAAATACGT CCCGCAAGAC TCTGACCAAG TGGCTTACTA CCGTGAAGAT
AAAACTGGTC AAGTGCTGCA GGAAGGTATT AACGAACTGG GTGCAATGTC ATCTTGGGTA
GCTGCTGCGA CCAGCTACTC AGTCAACGAT ACACCGATGA TTCCATTCTA CATCTACTAC
TCAATGTTCG GTTTCCAACG TATTGGCGAC ATGGCATGGG CTGCGGGTGA TATGCGTGCA
CGTGGCTTCT TAGTCGGTGG TACTTCAGGC CGTACAACAC TGAACGGTGA AGGTTTACAG
CATCAGGACG GTCACAGTCA CGTACTGGCT AACACTATTC CTAACTGTAT TACCTACGAT
CCAACTTACG GTTATGAAAT TGCCGTTATC GTTCAAGATG GTATTCGTCG CATGTACGGC
GAAAAACAAG AAGATATCTT CTACTACCTG ACCACAATGA ACGAAAACTA TATTCAGCCT
GAAATGCCAG AAGGTGCCGA GGAAGGTATC GTTAAAGGTA TCTACAAGTT GGAAACGGTT
AGCGGTTCGG GTAAAGGCAA AGTTCAGTTA ATGAGCTGTG GCACCATTCT TGAGCAAACC
CGCAAAGCGG CTCAAGCACT GGCAAAAGAC TTCGGCATCA CTGCCGACGT ATTCAGCGTC
ACCAGCTTCA ACGAACTGAC TCGCGATGGT CAAGCGGTTG AGCGTTGGAA CATGCTGCAC
CCAACTGAAA CGCCAAAACA AGCGTATATC AGCCAAGTGA TTTCAAGTGA TGCTCCGGCA
ATCGCTGCGA CTGACTACAT GAAGATCTAC GGCGAGCAGT TACGTGCATT TATGCCAACC
GATTATAAAG TGTTAGGTAC TGACGGTTTC GGTCGTTCAG ACAGCCGTGA CAACCTGCGT
CACCACTTCG AAGTGGACGC TAAGTTCATC GTTATCGCGG CACTGAAATC TCTGGTTGAT
CGTAAAGAGC TGCCTGTTGA TGTGTTAGCG AATGCCATCA AGGAATACGG CATCGACGCT
GACAAGATCA ATCCACAGTA CGCGTAA
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| Protein sequence | MSEDMLQDLD PLETQEWVDA LQAVLEQEGP ERAHFLLEKL IDKARRNGTH LPYTATTAYL
NTIPAGQEPH MPGNQEMERR IRAIIRWNAL AMVLRGSKKD LELGGHISSF ASSATIYDVC
FNHFFRAPNE KDGGDLVYFQ GHIAPGIYAR SFLEGRLTED QLANFRQEVD GKGLSSYPHP
KLMPDYWQFP TVSMGLGPIQ AIYQARFLKY LTDRGLKDCS EQTVYCFLGD GECDEPEALG
AIGLAAREEL DNLVFIINCN LQRLDGPVRG NGKIIQELEG EFRGAGWEVV KVIWGRYWDP
LLARDTSGKL LQLMEETVDG EYQNCKAKGG AYTREHFFGK YPETAEMVAN MSDDDIWRLN
RGGHDPVKVY AALDHARKTK GRPTVILAKT VKGYGLGDAG EGKNIAHNVK KMGIESIRYF
RDRFNIPIPD DQLEDLPFYH PGPDSEEVKY MMSRRAALHG SVPQRRQKFS EELEIPSLKI
FDSILQGSNG REISSTMAFV RVLTALLKDK KIGKNIVPII PDEARTFGME GLFRQVGIYA
HEGQKYVPQD SDQVAYYRED KTGQVLQEGI NELGAMSSWV AAATSYSVND TPMIPFYIYY
SMFGFQRIGD MAWAAGDMRA RGFLVGGTSG RTTLNGEGLQ HQDGHSHVLA NTIPNCITYD
PTYGYEIAVI VQDGIRRMYG EKQEDIFYYL TTMNENYIQP EMPEGAEEGI VKGIYKLETV
SGSGKGKVQL MSCGTILEQT RKAAQALAKD FGITADVFSV TSFNELTRDG QAVERWNMLH
PTETPKQAYI SQVISSDAPA IAATDYMKIY GEQLRAFMPT DYKVLGTDGF GRSDSRDNLR
HHFEVDAKFI VIAALKSLVD RKELPVDVLA NAIKEYGIDA DKINPQYA
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