Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0423 |
Symbol | |
ID | 4479330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 482516 |
End bp | 483061 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639724959 |
Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
Protein accession | YP_868072 |
Protein GI | 117918880 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000285307 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0465773 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTTG AGTTTGGTTG GTATCGCGCG GCGCGGCGCT GTGAATCACC ACATTTTAAC CGTCGGCCCT TTGGAGAGAT CAGCCTGTTG GTGATCCACA ATATTAGTTT GCCCGCGGGA TGCTTTGGGC TGCCTTATAT TGATCAATTA TTTCAAGGGT GTTTAGATAC CAGTGCCGAT GAAAGTTTCG CCGATTTAGC TGGGCTGGAG GTGTCGGCTC ATTTTTTAAT TCGCCGCGAT GGCGAATGTG TGCAGTATGT GAGTTGTGAA GATAGAGCTT GGCACGCGGG TGTATCCCGT TATGGCGAAA GGGAAAATTG TAATGATTTC TCTATTGGTA TTGAACTTGA AGGTACGGAT ACTGAACCCT ATACTGCCGC CCAATATCAG CAACTTACCG CATTGACCCA AGCTTTATTG GCACAATATC CTGCGTTAAC CGCAGAGCGG ATTGTGGGAC ATTGCGATAT TGCACCAATG CGGAAGACTG ACCCAGGCCC AAGCTTTGAC TGGCAAAGAT ATTTAGCGGC GCTGCGCGAC TTTTAG
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Protein sequence | MSFEFGWYRA ARRCESPHFN RRPFGEISLL VIHNISLPAG CFGLPYIDQL FQGCLDTSAD ESFADLAGLE VSAHFLIRRD GECVQYVSCE DRAWHAGVSR YGERENCNDF SIGIELEGTD TEPYTAAQYQ QLTALTQALL AQYPALTAER IVGHCDIAPM RKTDPGPSFD WQRYLAALRD F
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