| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0406 |
|---|
| Symbol | |
|---|
| ID | 4479313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 465040 |
|---|
| End bp | 466062 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639724942 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_868055 |
|---|
| Protein GI | 117918863 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02817] zinc-binding alcohol dehydrogenase family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00507024 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCA TAGGTTATCA AACCGCGGGA GCCGTCGATG CACCCAATGC ATTACAAAAC
ATCACCTTAC CCGAACCTAC ACCGCAAGGT TTTGACCTGT TAGTTGAGGT AAAAGCCATA
TCCGTTAATC CCGTCGATAC CAAAATCCGC ACATCGAGCT CAGCTCCAAC AGGGGAATAT
AAAATCCTCG GTTGGGATGC GGTCGGAGTC GTTAAAGCCG TGGGTGAAAA GGTGAGCCTG
TTTAAGGTGG GCGATGAAGT CTGGTATGCC GGCGATATTA GCCGCAGCGG CAGTTATGCC
GAGTATCAGT TAGTCGATGA GCGCATTGTG GGCCATAAAC CGCAAACCTT AAGCAATGCC
CAGGCTGCAG CCCTCCCCCT AACCAGTATT ACGGCTTGGG AGCTATTGTT TGATCGCTTA
GGCTTACCTC AGGATGGCTC GGCCACGAAT GCGCGAATTT TGATTATCGG TGCCGCTGGA
GGTGTAGGTT CTATCATCAC CCAACTTGCG GTCAAGCTGA CTGGCGCCGA GGTAATTGGC
ACAGCATCAC GCCCCGAATC TGCCGCTTGG GTGAAAAAGT TAGGCGCGAA TCAGGTTATC
AATCACCAAC AGCCACTCTC GCAGGAACTG GCGAAGTGGG ATATTGCCGA TGTCACCCAT
GTGATTAGCC TAACCCAAAC CGATAAGCAC TTTGACGAAA TCGTAAAAGT CCTCAGACCC
CAAGGTAAAC TGGCACTCAT TGACGATCCC GTCGGTCCAC TGGACGTGAT GAAGCTTAAA
CTTAAAAGCC TGTCGCTACA TTGGGAGCTC ATGTTTACCC GCAGCCTCTT TCAAACCGAA
GACATGATTG CTCAGCATCA TCTGCTCAAT CGTATCGCCG AGCTGATTGA TGCAGGCACA
GTTCAAAGTA CCTTTGGCGA ACACTATGGC GCCATTAATG CGCAAAACTT GCTTAAAGCC
CATGCACCAA TAGAGTCGGG TAAGGCCATA GGTAAAATCG TGCTCGAAGG ATTTAGCCAA
TGA
|
|---|
| Protein sequence | MKAIGYQTAG AVDAPNALQN ITLPEPTPQG FDLLVEVKAI SVNPVDTKIR TSSSAPTGEY
KILGWDAVGV VKAVGEKVSL FKVGDEVWYA GDISRSGSYA EYQLVDERIV GHKPQTLSNA
QAAALPLTSI TAWELLFDRL GLPQDGSATN ARILIIGAAG GVGSIITQLA VKLTGAEVIG
TASRPESAAW VKKLGANQVI NHQQPLSQEL AKWDIADVTH VISLTQTDKH FDEIVKVLRP
QGKLALIDDP VGPLDVMKLK LKSLSLHWEL MFTRSLFQTE DMIAQHHLLN RIAELIDAGT
VQSTFGEHYG AINAQNLLKA HAPIESGKAI GKIVLEGFSQ
|
|---|
| |