| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0381 |
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| Symbol | |
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| ID | 4478963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 423148 |
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| End bp | 425325 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639724917 |
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| Product | ABC transporter related |
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| Protein accession | YP_868030 |
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| Protein GI | 117918838 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTGTTA CAGCTTCTGA AAAAGTTGAA CAGTGGACTA TTTCCGCTTC ACAGCGAGTA
ATAGTAGACC CACTGTTAGA TTGTTTAGTG CTCCTTACTG AACATTTTGG GAATCCATGC
TCAAGTGATT CACTTGCGGC AGGCTTGCCT TTGTCTGGAG CGGTACTAAC ACCCGATCTG
CTCCCTCAAG CAGCATCACG CGCAGGATTA GCGGCAAAAT TATCTCGTAA AGGTTTAAAT
GAGATATCGC CAATACTGCT ACCCTGCATC TTATTATTAA AGGATAAAAA AGCCTGTGTT
TTGCGGGAGT TTGACATCGA ATCCGATCGA GCTGTCATTC AAATGCCCGA GACAGGGGGC
GAGGAAATAC TCACAATAGA ATCGCTTGAA ACTCTGTATG TTGGCTATCT ATTTCTCGTT
AAACAAGAAT ATCGTGGGGA CATGGGGTTC GATGTCTATT TACACGACAA CAAAACCCAC
TGGTTAGTCC AAACTCTCAA GGACTCAGCC CCCATTTACC GTGATGCCTT AATTGCCTCG
ATTCTCGTGA ATATTTTCGC GTTGGTTTCT CCGCTGTTTA TCATGAATGT GTACGATAAA
GTCGTACCTA ACCTTGCATT TGATTCACTT TGGGTATTAG CAATTGGTGC ATCCATTGCG
TATTTATTTG ACCTTGTTAT GCGTCAACTA AGAAGCTATT TAATTGATGT GGCAGGTAAA
AAGGTAGATA TCATTGTTTC ATCTCGTCTA TTTGCGAAGG CAATTGGGAT TCCATTAGAA
AAACGCTCTC CGAGTGTTGG AGGCATGGCA AAACAACTTG GGGAGTTTGA TAGTATTCGG
GAAATATTAA CCTCTGCGAC TATTACAACC TTAGTTGATC TTCCTTTTGC ATTATTTTTC
TTGATTGTCA TTTATATCGT TTCAGGGGAT TTAGCCGTTA TTCCAGTTGT TGGAGGCTTG
ATCATTCTTG GTTTTACGCT GTATACACAG CCCAAGTTAA AAGCGGCTAT CGAAGAAGGT
AATAAATTCT CCAGCTTAAA ACATGGACAT TTGATTGAAA GTCTCTCTGC ACTTGAATCG
ATTAAGGCTA ACGGAGCAGA AGGAATTGTG CAAAAAAGCT GGCAACAGAT GATTGGCCAT
AGTGCTAACT GGCAATTGCG CTCGAAAAAG CTCTCAAATT CAGTCTCGAA TTTCGCTAAC
TTTATCGTGC AATTTACCGT GGTCTGCGTG GTAATTTTAG GTGTTTACCG TGTGTCGGAT
AATGCAATTT CCATGGGCGG CATTATTGCG GCTGTGATGT TATCAAGTAG GGCGATAGCT
CCAATGGCGC AACTCGCGGG ATTGTTAACA CGCGCCAATC ACACCGCCAG TGCTCTACGA
CAGCTCAACG AACTTATGAC CCAAGAAGAT GAATTTGAAA ATAAAGGTCA TCTGGTGAGT
AAGTTGCGGT TAATCGGGAA AATTAACGCT GATCATGTTG GCTTCAGTTA TCCTGGCTCT
GAAAAACCGG TACTTCATCC GCTCACATTA ACGATTAATC CTGGTGAGCG AGTTGCAATT
ATTGGCCGCA ATGGTTCAGG TAAAAGTACT TTAGCTAAAC TTCTGGTTGG ACTCTTCCAA
CCCACAACAG GCAGCCTGCG GTACGACGGT GTCGACTCTG CCCAAATCCA TCCCAGTGAT
TTGCGCCGTA ACTTTGGCTA CTTACCTCAA GATGTCACCC TATTCCATGG AACAATCAGG
GACAACATTC TATTTGGTAC TCGCCAAGTG ACTGAGCATC AACTGATCCG TGCGGTACAA
CTTTCAGGAG TGAGTCAGTT CACTCACATG GAAGCAGAAG GGCTAGATCA GCAGGTTGGT
GAAGGAGGTA TGTCTCTTAG TCGCGGCCAA CGACAAACCG TAGCCCTTGC CCGTGCGACA
CTGAACGACC CGCCAGTGCT GTTAATGGAT GAACCTACAG CCAGTTTGGA TGCCCGAGCG
GAACAACAAT TTATCCGCTC AATGCAAAAT GTTAGCAAGG ATAGAACCTT GCTACTAATC
ACTCATAAAA TGCATTTATT ACAATTGGTT GACCGAATTA TTGTGCTGGA ACGCGGCCAT
GTGGTTGCCG ACGGTCCTAA AGCCGAAGTG TTAGAAAAAC TCAATTTTGG CCTAGTTAAT
GGAGGCGCCA GAAAATGA
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| Protein sequence | MPVTASEKVE QWTISASQRV IVDPLLDCLV LLTEHFGNPC SSDSLAAGLP LSGAVLTPDL
LPQAASRAGL AAKLSRKGLN EISPILLPCI LLLKDKKACV LREFDIESDR AVIQMPETGG
EEILTIESLE TLYVGYLFLV KQEYRGDMGF DVYLHDNKTH WLVQTLKDSA PIYRDALIAS
ILVNIFALVS PLFIMNVYDK VVPNLAFDSL WVLAIGASIA YLFDLVMRQL RSYLIDVAGK
KVDIIVSSRL FAKAIGIPLE KRSPSVGGMA KQLGEFDSIR EILTSATITT LVDLPFALFF
LIVIYIVSGD LAVIPVVGGL IILGFTLYTQ PKLKAAIEEG NKFSSLKHGH LIESLSALES
IKANGAEGIV QKSWQQMIGH SANWQLRSKK LSNSVSNFAN FIVQFTVVCV VILGVYRVSD
NAISMGGIIA AVMLSSRAIA PMAQLAGLLT RANHTASALR QLNELMTQED EFENKGHLVS
KLRLIGKINA DHVGFSYPGS EKPVLHPLTL TINPGERVAI IGRNGSGKST LAKLLVGLFQ
PTTGSLRYDG VDSAQIHPSD LRRNFGYLPQ DVTLFHGTIR DNILFGTRQV TEHQLIRAVQ
LSGVSQFTHM EAEGLDQQVG EGGMSLSRGQ RQTVALARAT LNDPPVLLMD EPTASLDARA
EQQFIRSMQN VSKDRTLLLI THKMHLLQLV DRIIVLERGH VVADGPKAEV LEKLNFGLVN
GGARK
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