| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0376 |
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| Symbol | |
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| ID | 4478958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 417068 |
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| End bp | 418987 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639724912 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_868025 |
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| Protein GI | 117918833 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0574936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTGT TTAGACAGAT ATATTCGCTG CTTTTTAGCC TGTTCTTGCT GGTTGTTGCA
AGCCTTGGCT ATGTGCAATT TACTGAGACA CAAAGCTTTT TGACCAAGCA AATGGAATCG
GATCTAAACA ATACCAGTAC CTCGCTTGGA CTCATGCTTA CTCCAGCACT GCAAGCAGGC
GATACCGCCG CAGCCGAAAC CTTAGTTAAT GTGATATTTG AGGGCGGCTA TTACAAAAAC
ATTAAGCTGA CCTGGATGGT TGATGGCAAA CAACAAGAAT GGAACAACCC ACTCAAAATT
GAAGACGTGC CTCAATGGTT CATCAATCTC AATCTATTTA AAACCATCAA AAAAGAAAGC
ACTATCACCT CAGGATGGTT ACAGCTCGCT CAGCTAGAAA TTACCGCGCA CCCAGGTTTT
GGTTACCATG AATTGTGGCG AATTATGTCT AATACCATTA TCGCCTTCTC ATTACTCTTT
TTAGTCGCCA TTTTTACCGC GAGATTAGGC TTAACCTGGA TCTTAAAACC ACTGCATGCC
TTATCTGATC ATGCCAAAAA GATTGCCGCC CGCCAGTTTG GCCCCGATAT GCCGCTGCCT
AAAACCACTG AACTCAAGGA CTTGGTTACC GCATTCAACA GCATGTCAGC CCAGCTCAAG
CAATTGTTCC AATCACTCGA TGAAGAAGTC GGCTCTTTAC GCAAAAAGAA CCTCACCGAT
CCCGCCTCTG GGCTGCCTAA TCGCCAATAT GTGGTCAGTC GCCTCAATGG TTGGCTAAGC
GAACCGAGCA GTGGTGCCCT ATTCTTAGCT AAGCTCGACT GGCTCGAAGA AGTACACAGC
AAATATGGCT ATCAAGTTCG GGATGAAACC ATTCGCCTAT TAGCCGAAAA ACTGGTTCAG
CAACTCAATG AGATCACCCC ATCCGTGATA GCGCGTATTG CCGCGTTTGA ATTTGCTTTC
CTCGTTACCG ATGTCGAACA CGACCAAATC AGTAAGTACC TGCAAACCCT GATCCGCACC
ATCAACCAAG AAATATCTAA AGCAGGCTGT AAGCCCAATG AGAACTTTGC CATCGGTGTC
GCTGAACGCA TTGGTCAGAT GAAGGTGTCA GACATTCTGG CGCAGGCGGA TAACGCGCTG
CAAAAAGCCC TGAAGGAACA TAAATCCTTC CATTGGTTCG AAACAACAGA GCAACAGCTG
TTTACCCGTG AACAGTGGCG CGACAACTTA AGCCATGCCA TCAGCAATAA GAAGTTTAAG
TTCCGTTGGC AGCCTATCCA GTTTTGTAAT GGTGATGGTG TCGCCCAGCG AGAGCTTTAC
TGTCAACTTG AGTTGGGTGA TAAGGTGGCC CACGCTGGCC AGTTTATGCC CTATATTGAA
CTGCTATCAC TCGGCTCTCT GCTCGATAAG TGCCTGATTG AGACTGTGTA TGAGCAAAAA
CTACTTGAGC GTAACTATGA GCCACTGGCA ATCAACCTGA CGCATCAGAG TATTAGTGAT
ACCCTGTTCC ATGACTGGCT CAATCACTTC CTGCGCAGCA TGCCACAGGT CGAGCGTATC
TGTTTTGAAA TCCCCGAGGC AGGTGTCTAC AGCGATTTAG AGTCCTGTGT GCTGTTATGC
AATATTATTC GTGATAATGG CGCTAAATTT GGTATCGACC ACTTTGGTCG CCAATTTGGC
TCAATGTCGT ACCTTCAAGA GCTCAGACCA AGTTACGTCA AGCTCGACCA ATCCTTCTCC
TACTATGACG AGGCCTCACA TAATAGCGAG CTCTGCCGCG CCATTATCAA TGTCGCCAAA
GGATTGGATA TTCAGGTGAT AGTGACAGGT ATCCAAGAAA AAGCGCAGTT AGAACGCTTT
GATGAGCTTA AAACTGACGC CTATCAAGGC TTTATCGTTC CGCCAGAGAA TATCGACTAA
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| Protein sequence | MTLFRQIYSL LFSLFLLVVA SLGYVQFTET QSFLTKQMES DLNNTSTSLG LMLTPALQAG
DTAAAETLVN VIFEGGYYKN IKLTWMVDGK QQEWNNPLKI EDVPQWFINL NLFKTIKKES
TITSGWLQLA QLEITAHPGF GYHELWRIMS NTIIAFSLLF LVAIFTARLG LTWILKPLHA
LSDHAKKIAA RQFGPDMPLP KTTELKDLVT AFNSMSAQLK QLFQSLDEEV GSLRKKNLTD
PASGLPNRQY VVSRLNGWLS EPSSGALFLA KLDWLEEVHS KYGYQVRDET IRLLAEKLVQ
QLNEITPSVI ARIAAFEFAF LVTDVEHDQI SKYLQTLIRT INQEISKAGC KPNENFAIGV
AERIGQMKVS DILAQADNAL QKALKEHKSF HWFETTEQQL FTREQWRDNL SHAISNKKFK
FRWQPIQFCN GDGVAQRELY CQLELGDKVA HAGQFMPYIE LLSLGSLLDK CLIETVYEQK
LLERNYEPLA INLTHQSISD TLFHDWLNHF LRSMPQVERI CFEIPEAGVY SDLESCVLLC
NIIRDNGAKF GIDHFGRQFG SMSYLQELRP SYVKLDQSFS YYDEASHNSE LCRAIINVAK
GLDIQVIVTG IQEKAQLERF DELKTDAYQG FIVPPENID
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