Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0280 |
Symbol | |
ID | 4479188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 313623 |
End bp | 314726 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639724812 |
Product | ABC transporter related |
Protein accession | YP_867929 |
Protein GI | 117918737 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000359187 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCGCAAA TCATCGCTGA TCTGCATTGC CAGATCCAAA ACCATAAACA TATTAAACTG AGCGCCGAAT TTAGCTGTAA GGCGGGTGAG GTGTTGGCTG TCGTCGGGCC TTCGGGGGGC GGTAAGACAA CGTTACTGCG GATGATCGCA GGGCTGAATC ATCCCGATGC GGGCAGTATT GTGTTTGGTG AAACGCTATG GTTCGACCAT CAAAGTCGCA CCGCACTAAC GCCGCAGCAG CGCCATATCG GCTATATGCC ACAGCATTTT GGGCTTTTTC CTAATCTTAC CGCGCTCGAG AACGTGGTTG CAGGGCTTGA CCATATTCCC AAATCGGAGC GAATTGCGAG GGCGAAGGAC TGGTTAGAAC GGGTCAATTT GCATGGGTTG CCCGATAGAC TGCCTATGCA CCTCTCTGGT GGTCAACGCC AGCGGGTTGC GCTTGCTCGG GCCCTTGCCC GTGAACCGTC GGTGTTGTTA CTCGATGAGC CCTTTTCGGC AGTGGACAGA GAAACCCGCG AGCGTTTATA CCTCGAGCTT GCTCGCCTAA AAGAGCAGCT ACTTTGCCCC GTGATTATGG TGACCCACGA TTTAAACGAA GCGCTGCTGC TGGCCGATTC GATGATCTTG ATTAGCCAAG GTCAGATGTT GCAGCAGGGC GCGCCGTTTG AGGTGTTATC GCGTCCACGT AACGAGGCGG TTGCGCGGCA GATGGGCTTA AGAAATATTT TCGACGGCGA AGTGGTGTTC CAAGACCGCA CTAAAGACAT CACTTGGCTC AAATTTGGTG AGCAGCTGAT CGCCAGTGAT TTTGGCAAAG ACCGCAGCGT GGGCAGTAAA GTGCGTTGGG TGATCCCGAA TCAAGGCATC AGATTTAACG CCATCTCAAA TGGACGTTTA TGCCGCAGTT TTAATAAGTT AGATGTCACC ATCGACTCCT TACTGGTGAT GGGCGAGTCG GTGCGCGTGG TCTGTTATGC CACTGGGACT GAGCTACAAC TTAATACGGA AGTGTCACTC CACCTTGCGC AGAAGCTTGG CTTAACCAAG GGGATGCAAA CCACAGTCGC GCTTAAATCT GAACAAATTC ATATTTTAGA GTAG
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Protein sequence | MAQIIADLHC QIQNHKHIKL SAEFSCKAGE VLAVVGPSGG GKTTLLRMIA GLNHPDAGSI VFGETLWFDH QSRTALTPQQ RHIGYMPQHF GLFPNLTALE NVVAGLDHIP KSERIARAKD WLERVNLHGL PDRLPMHLSG GQRQRVALAR ALAREPSVLL LDEPFSAVDR ETRERLYLEL ARLKEQLLCP VIMVTHDLNE ALLLADSMIL ISQGQMLQQG APFEVLSRPR NEAVARQMGL RNIFDGEVVF QDRTKDITWL KFGEQLIASD FGKDRSVGSK VRWVIPNQGI RFNAISNGRL CRSFNKLDVT IDSLLVMGES VRVVCYATGT ELQLNTEVSL HLAQKLGLTK GMQTTVALKS EQIHILE
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