Gene Shewana3_0265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0265 
Symbol 
ID4479173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp297172 
End bp299271 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content47% 
IMG OID639724797 
Producthypothetical protein 
Protein accessionYP_867914 
Protein GI117918722 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000228556 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAGTTT TGCAAACACT CAAACTTACG GGTGAGAATG AGGCGCTGAA ACGTCAAGAG 
CTTAAACAAT ACTTCAATCA AACCTGGGCA CTCTATGAAT CCCTCTTCGA GCGGATAAAG
CACGACGAGG CTTATTACGT CAAAGCCGAG CCACTGCGCC ATCCGTTGAT TTTTTACTTT
GGCCATACCG CCACTTTCTA TATCAATAAA CTCAAGCTGG GTAAGTATCT CGATGAACGA
GTAAATGATC ACTTTGAATC TATGTTTGCC ATCGGTGTGG ATGAAATGTC TTGGGATGAC
CTCGACGAAA CCCACTATCA ATGGCCAAGT GTCGCTGAGG TAAAAACGTA TCGGGATCAA
GTCAAACAGG TCGTCAATCA ACTGATTGAT ACCATGCCAA TCACACTGCC GATCAGCCAA
GACAGTCCCG CTTGGGTCAT CTTGATGGGC ATAGAACACG AGCGTATTCA CCTAGAGACC
TCTTCCACCA TTATTCGCCA GCTTCCATTA GAGGACGTGA GTGCCAATGC TCAGTGGCCA
GAGTGTCAGG ATGTTGGCAG CGCCGAGCCA AATCAACTAC TTGCCGTGGC GGGTAAAAAA
ATCACCTTAG GTAAAAAAGA GCAAGACAAC ACCTATGGCT GGGATAACGA ATACGGTAAC
AAGAGCTTTA AAGTCGCCGA CTTTAAAGCC TCAAAGTACT TAGTGAGTAA TCAAGAATAC
CTAGTCTTTG TCGAAGCGGG GGGCTATCAA ACCCAAGACT ATTGGAATGA GGAAGGCCAA
GCTTGGCTGG CGTATACCCA AGCCCAAATG CCACGCTTTT GGCGTCGCCG CGATGATAAA
TGGTGGCAAC GTAACCTCAC CAGCGAAATC CCTTTGCCGC TCAATTGGCC CGTCGAGGTC
AATCAACTCG AAGCTAAGGC CTTTTGTAAT TGGAAGGCGC GCCAAAGTCA GAGCAATATT
CGCCTGCTCA CCGAAGCAGA ATGGTATATC TTGCGGGAAA ATGTACCGAG CGATGCCCCC
GATTGGCATG AAGTCCCTGG CAATACCTCG CTGGCTTATT ACGCCTCTTC CTGTCCGGTA
AACCGCTTTA AACACAATGA TTTTTATGAC ATTGTCGGCA ATGTCTGGCA ATGGACCGAA
ACCGCTATCG ACGGTTTTAA TGGTTTTGCC GTACATCCGC TCTACGATGA TTTTTCGACG
CCTACCTTCG ATGGCAAACA CAATCTGATT AAAGGTGGTT CGTGGATTTC AACGGGCAAT
GAAGCTATTG CAGCCTCACG CTATGCCTTT AGGCGTCACT TTTATCAACA TGCCGGATTC
CGTTACGTCG AGTCGTTGCA AAATCCAGAA CAGATGGCCG AGGTTAATCT GTACGAAACC
GATGAACTGA TTTCCCAGTA TTTAGAATTC CACTATGGCG CCGAGTACTT TGGTGTACCG
AATTTTTGCG TTAATGGGGT ACAACAAGCA CTCAACGAGA TCCAACTCGA GCACACCACC
AAGGCCTTAG ATATTGGTTG CTCTGTCGGA CGCGCCAGTT TTGAGTTAGC CAAAGTGTTC
GACCATGTGG ATGGCATCGA CTTTTCGGCA CGCTTTATCC AACAGGCCTA CGCTTTGACA
GAGCAAGGCG AAAAACGCTA CACCATTCGC ACCGAGGGAG ACTTACAGGA ATTCAAGAGC
GCCAGCCTTG CTAAACTGGG ATACCTTGGC GAAGCTAAAA AAGTCAATTT TATCCAAGGG
GATGCCTGCA ATCTCAAGCC AATCTACACA GGATACGATT TGGTCTACGC CTCAAATCTA
ATCGACAGAT TGAACGACCC GCAACACTTC CTCACCAATA TTGGGCAACG CATCAATCAA
GGGGGATATC TGGTTATCGC CTCACCTTAT ACTTGGCTCG AAGACCACAC GCCAAAGGAG
AAATGGCTTG GGGGGATTAA AGTCAAAGGA GAAAACTTCA CAACTTTAGA TGGGTTAACC
GAAACCTTGA TAGGCCAATT TGAACTGGTT GCGGTGAAAG AAATCCCCTT CGTTATTCGC
GAAACCAAGC GTAAATTCCA GCATTCGATT TCAGAGATGA CGATCTGGCG TAAGCGTTAG
 
Protein sequence
MPVLQTLKLT GENEALKRQE LKQYFNQTWA LYESLFERIK HDEAYYVKAE PLRHPLIFYF 
GHTATFYINK LKLGKYLDER VNDHFESMFA IGVDEMSWDD LDETHYQWPS VAEVKTYRDQ
VKQVVNQLID TMPITLPISQ DSPAWVILMG IEHERIHLET SSTIIRQLPL EDVSANAQWP
ECQDVGSAEP NQLLAVAGKK ITLGKKEQDN TYGWDNEYGN KSFKVADFKA SKYLVSNQEY
LVFVEAGGYQ TQDYWNEEGQ AWLAYTQAQM PRFWRRRDDK WWQRNLTSEI PLPLNWPVEV
NQLEAKAFCN WKARQSQSNI RLLTEAEWYI LRENVPSDAP DWHEVPGNTS LAYYASSCPV
NRFKHNDFYD IVGNVWQWTE TAIDGFNGFA VHPLYDDFST PTFDGKHNLI KGGSWISTGN
EAIAASRYAF RRHFYQHAGF RYVESLQNPE QMAEVNLYET DELISQYLEF HYGAEYFGVP
NFCVNGVQQA LNEIQLEHTT KALDIGCSVG RASFELAKVF DHVDGIDFSA RFIQQAYALT
EQGEKRYTIR TEGDLQEFKS ASLAKLGYLG EAKKVNFIQG DACNLKPIYT GYDLVYASNL
IDRLNDPQHF LTNIGQRINQ GGYLVIASPY TWLEDHTPKE KWLGGIKVKG ENFTTLDGLT
ETLIGQFELV AVKEIPFVIR ETKRKFQHSI SEMTIWRKR