Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0265 |
Symbol | |
ID | 4479173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 297172 |
End bp | 299271 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639724797 |
Product | hypothetical protein |
Protein accession | YP_867914 |
Protein GI | 117918722 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000228556 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCAGTTT TGCAAACACT CAAACTTACG GGTGAGAATG AGGCGCTGAA ACGTCAAGAG CTTAAACAAT ACTTCAATCA AACCTGGGCA CTCTATGAAT CCCTCTTCGA GCGGATAAAG CACGACGAGG CTTATTACGT CAAAGCCGAG CCACTGCGCC ATCCGTTGAT TTTTTACTTT GGCCATACCG CCACTTTCTA TATCAATAAA CTCAAGCTGG GTAAGTATCT CGATGAACGA GTAAATGATC ACTTTGAATC TATGTTTGCC ATCGGTGTGG ATGAAATGTC TTGGGATGAC CTCGACGAAA CCCACTATCA ATGGCCAAGT GTCGCTGAGG TAAAAACGTA TCGGGATCAA GTCAAACAGG TCGTCAATCA ACTGATTGAT ACCATGCCAA TCACACTGCC GATCAGCCAA GACAGTCCCG CTTGGGTCAT CTTGATGGGC ATAGAACACG AGCGTATTCA CCTAGAGACC TCTTCCACCA TTATTCGCCA GCTTCCATTA GAGGACGTGA GTGCCAATGC TCAGTGGCCA GAGTGTCAGG ATGTTGGCAG CGCCGAGCCA AATCAACTAC TTGCCGTGGC GGGTAAAAAA ATCACCTTAG GTAAAAAAGA GCAAGACAAC ACCTATGGCT GGGATAACGA ATACGGTAAC AAGAGCTTTA AAGTCGCCGA CTTTAAAGCC TCAAAGTACT TAGTGAGTAA TCAAGAATAC CTAGTCTTTG TCGAAGCGGG GGGCTATCAA ACCCAAGACT ATTGGAATGA GGAAGGCCAA GCTTGGCTGG CGTATACCCA AGCCCAAATG CCACGCTTTT GGCGTCGCCG CGATGATAAA TGGTGGCAAC GTAACCTCAC CAGCGAAATC CCTTTGCCGC TCAATTGGCC CGTCGAGGTC AATCAACTCG AAGCTAAGGC CTTTTGTAAT TGGAAGGCGC GCCAAAGTCA GAGCAATATT CGCCTGCTCA CCGAAGCAGA ATGGTATATC TTGCGGGAAA ATGTACCGAG CGATGCCCCC GATTGGCATG AAGTCCCTGG CAATACCTCG CTGGCTTATT ACGCCTCTTC CTGTCCGGTA AACCGCTTTA AACACAATGA TTTTTATGAC ATTGTCGGCA ATGTCTGGCA ATGGACCGAA ACCGCTATCG ACGGTTTTAA TGGTTTTGCC GTACATCCGC TCTACGATGA TTTTTCGACG CCTACCTTCG ATGGCAAACA CAATCTGATT AAAGGTGGTT CGTGGATTTC AACGGGCAAT GAAGCTATTG CAGCCTCACG CTATGCCTTT AGGCGTCACT TTTATCAACA TGCCGGATTC CGTTACGTCG AGTCGTTGCA AAATCCAGAA CAGATGGCCG AGGTTAATCT GTACGAAACC GATGAACTGA TTTCCCAGTA TTTAGAATTC CACTATGGCG CCGAGTACTT TGGTGTACCG AATTTTTGCG TTAATGGGGT ACAACAAGCA CTCAACGAGA TCCAACTCGA GCACACCACC AAGGCCTTAG ATATTGGTTG CTCTGTCGGA CGCGCCAGTT TTGAGTTAGC CAAAGTGTTC GACCATGTGG ATGGCATCGA CTTTTCGGCA CGCTTTATCC AACAGGCCTA CGCTTTGACA GAGCAAGGCG AAAAACGCTA CACCATTCGC ACCGAGGGAG ACTTACAGGA ATTCAAGAGC GCCAGCCTTG CTAAACTGGG ATACCTTGGC GAAGCTAAAA AAGTCAATTT TATCCAAGGG GATGCCTGCA ATCTCAAGCC AATCTACACA GGATACGATT TGGTCTACGC CTCAAATCTA ATCGACAGAT TGAACGACCC GCAACACTTC CTCACCAATA TTGGGCAACG CATCAATCAA GGGGGATATC TGGTTATCGC CTCACCTTAT ACTTGGCTCG AAGACCACAC GCCAAAGGAG AAATGGCTTG GGGGGATTAA AGTCAAAGGA GAAAACTTCA CAACTTTAGA TGGGTTAACC GAAACCTTGA TAGGCCAATT TGAACTGGTT GCGGTGAAAG AAATCCCCTT CGTTATTCGC GAAACCAAGC GTAAATTCCA GCATTCGATT TCAGAGATGA CGATCTGGCG TAAGCGTTAG
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Protein sequence | MPVLQTLKLT GENEALKRQE LKQYFNQTWA LYESLFERIK HDEAYYVKAE PLRHPLIFYF GHTATFYINK LKLGKYLDER VNDHFESMFA IGVDEMSWDD LDETHYQWPS VAEVKTYRDQ VKQVVNQLID TMPITLPISQ DSPAWVILMG IEHERIHLET SSTIIRQLPL EDVSANAQWP ECQDVGSAEP NQLLAVAGKK ITLGKKEQDN TYGWDNEYGN KSFKVADFKA SKYLVSNQEY LVFVEAGGYQ TQDYWNEEGQ AWLAYTQAQM PRFWRRRDDK WWQRNLTSEI PLPLNWPVEV NQLEAKAFCN WKARQSQSNI RLLTEAEWYI LRENVPSDAP DWHEVPGNTS LAYYASSCPV NRFKHNDFYD IVGNVWQWTE TAIDGFNGFA VHPLYDDFST PTFDGKHNLI KGGSWISTGN EAIAASRYAF RRHFYQHAGF RYVESLQNPE QMAEVNLYET DELISQYLEF HYGAEYFGVP NFCVNGVQQA LNEIQLEHTT KALDIGCSVG RASFELAKVF DHVDGIDFSA RFIQQAYALT EQGEKRYTIR TEGDLQEFKS ASLAKLGYLG EAKKVNFIQG DACNLKPIYT GYDLVYASNL IDRLNDPQHF LTNIGQRINQ GGYLVIASPY TWLEDHTPKE KWLGGIKVKG ENFTTLDGLT ETLIGQFELV AVKEIPFVIR ETKRKFQHSI SEMTIWRKR
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