Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0255 |
Symbol | |
ID | 4479163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 286869 |
End bp | 287768 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639724787 |
Product | cation diffusion facilitator family transporter |
Protein accession | YP_867904 |
Protein GI | 117918712 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000211411 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000259918 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTCAGA CTTCCCAATA CGATTTTTGG GTCAAACTGG CTAGTCGCGC TTCCGTGGCT ACCGCTTTGA CCCTTATTCT TATCAAGCTG TTAGCTTGGT TATATTCTGG CTCGGCCAGT ATGCTGGCGT CCTTAACGGA TTCCTTCGCC GACGCACTCG CCTCAATCAT CAACTTTATC GCCATTCGTT ATGCCATAGT CCCCGCCGAC CATGACCACA GATACGGCCA CGGTAAAGCG GAGCCGTTAG CGTCGCTGGC GCAATCGGCC TTTATTATGG GCTCGGCATT CCTGCTGCTG TTTTATGGGG GAGAGCGGTT ACTCAATCCC GCCCCGGTTG AGCACGCAAC TTTAGGTGTG GTGGTCTCAG TCGTCGCGAT TGTGTTGACA TTAGCATTAG TGATGTTGCA AAAGCGGGCG CTGGCGGCAA CCAATAGCAC GGTAGTTGAA GCCGATTCGT TGCACTATAA GTCGGATTTA TTCCTCAATG GCGCCGTGTT GCTCGCACTC GTCTTGTCCC AATATGGCTG GTGGTGGGCC GATGGGCTCT TTGCTGTGCT TATCGCTTGC TATATCGGCC AACAGGCATT TGACCTAGGT TACCGCTCTA TTCAAGCGCT GCTCGACCGT GAGCTGGATG AGGACACTCG TCAACGGATT AAACAAATCG CTAAGGAAGA CTCCCGAGTC CAAGGGCTGC ATGATTTGCG CACACGCCAA GCGGGTAAGA CTATCTTTAT TCAATTCCAT TTAGAGTTGG ATGGCAATTT GAGTCTGAAC GAAGCCCACA GTATTGCCGA TACCACGGGA CTGAGGGTGA AAGCCGCCTT TGAAGATGCC GAGGTGATTA TTCACCAAGA TCCTGTGCAG GTGGAACCTA GTGCTGCGGC CTCATCATAA
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Protein sequence | MTQTSQYDFW VKLASRASVA TALTLILIKL LAWLYSGSAS MLASLTDSFA DALASIINFI AIRYAIVPAD HDHRYGHGKA EPLASLAQSA FIMGSAFLLL FYGGERLLNP APVEHATLGV VVSVVAIVLT LALVMLQKRA LAATNSTVVE ADSLHYKSDL FLNGAVLLAL VLSQYGWWWA DGLFAVLIAC YIGQQAFDLG YRSIQALLDR ELDEDTRQRI KQIAKEDSRV QGLHDLRTRQ AGKTIFIQFH LELDGNLSLN EAHSIADTTG LRVKAAFEDA EVIIHQDPVQ VEPSAAASS
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