| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0231 |
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| Symbol | |
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| ID | 4476476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 260229 |
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| End bp | 260879 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639724760 |
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| Product | cytochrome c biogenesis protein CcmA |
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| Protein accession | YP_867881 |
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| Protein GI | 117918689 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.196504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000426589 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | GTGACAAATA TAACTTCAGT AAACACACTG GTATCGGCGA GCAAGCTGAC ATGTATCCGC
GAAGAACGCA TCCTGTTTGA TGAATTAAGT TTTGATATTA ATGCTGGCGA TATCGTCCAG
ATCGAAGGCC CAAATGGCGC CGGCAAAACC AGTTTATTAC GTATATTGGC AGGCTTATCT
CGTCCCTACG CTGGACAAAC TTTTTATCTC AATGAAGATA TTAACCGTTA CCGCGACGAA
TATAACGAAG ACCTATTGTA TTTAGGCCAT CTTGCTGGGG TGAAATCCGA ATTATCCGCT
GAAGAAAACC TTAACTTCAA TTTAAGAATC AGTGGCTATG ATGATTTCGA TACTTCCGCC
ATTCTCGCTA AAGTGAATTT AGCCGGGTTT GAGGAAGCAC TCGCCGGGCA TTTATCCGCT
GGTCAACACC GCCGTACAGC ATTAGCCAGA CTCTGGCACA ATGACTGTAA AGTGTGGATC
CTCGATGAGC CTTTTACCGC AATCGATAAA AGAGGTGTCG AAGAGCTTGA ACAGTTATTT
ATTCAACATG CGGATAATGG TGGCTGCGTG ATCCTCACCA CTCACCAAGA TATGGGCATT
ATCAAAGATG ATAGGCTTCG TAAAATTCGT CTAGATTATC GCTTCGTATA A
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| Protein sequence | MTNITSVNTL VSASKLTCIR EERILFDELS FDINAGDIVQ IEGPNGAGKT SLLRILAGLS
RPYAGQTFYL NEDINRYRDE YNEDLLYLGH LAGVKSELSA EENLNFNLRI SGYDDFDTSA
ILAKVNLAGF EEALAGHLSA GQHRRTALAR LWHNDCKVWI LDEPFTAIDK RGVEELEQLF
IQHADNGGCV ILTTHQDMGI IKDDRLRKIR LDYRFV
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