Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0227 |
Symbol | |
ID | 4476472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 258101 |
End bp | 258586 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639724756 |
Product | cytochrome c-type biogenesis protein CcmE |
Protein accession | YP_867877 |
Protein GI | 117918685 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2332] Cytochrome c-type biogenesis protein CcmE |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.153064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000366599 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | GTGAACCCAA GACGCAAAAA GAGACTGACG TTAGCTGTAG CATTAATCGG TGGCGTAGCC GCGATTGCTT CGCTTCTGCT GTATGCGCTG AACTCCAACT TAAACTTATT CTATACACCG TCGGAGATCG TACACGGTAA AACCGATACC GGTGTTAAAC CCGAAGCGGG CCAACGTATT CGCGTAGGCG GTATGGTAAC GGTTGGTTCT ATGGTGCGCG ATCCAAACAG CCTGCACGTG CAATTTGCCG TGCATGACTC ATTAGGTGGC GAAATTCTCG TGACCTATGA CGATCTGCTG CCGGATCTGT TCCGCGAAGG CCAAGGTATT GTGGCACAAG GTGTATTAGG TGAAGACGGC AAATTGGCCG CAACCGAAGT ACTGGCTAAG CATGACGAAA ACTACATGCC GCCAGAAGTG GCCGAAGCCA TGGGCCAAAA ACATGAAAAG TTAGATTACA GCCAGCAAAA ATCGGCGGCG CAATAA
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Protein sequence | MNPRRKKRLT LAVALIGGVA AIASLLLYAL NSNLNLFYTP SEIVHGKTDT GVKPEAGQRI RVGGMVTVGS MVRDPNSLHV QFAVHDSLGG EILVTYDDLL PDLFREGQGI VAQGVLGEDG KLAATEVLAK HDENYMPPEV AEAMGQKHEK LDYSQQKSAA Q
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