| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0161 |
|---|
| Symbol | |
|---|
| ID | 4478298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 184805 |
|---|
| End bp | 185566 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639724681 |
|---|
| Product | type II secretion system protein N |
|---|
| Protein accession | YP_867811 |
|---|
| Protein GI | 117918619 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTTTGA TAAAAAAAAT CATTATAGGT GTACTGGTTT ATTTAGTGTT TTTGCTGGCG
TTATTTCCCG CCAGTGTCGC TGTGCGCCTC GCACCACTGC CTGCAAACGT AGGGATTTCT
GGGGTGAGCG GCAGTATTTG GTCTGGCAGC ATCGAAACCT TAAATTTGCA GCAACGCCAA
TTGGAACAAG TTCGCTGGGA GCTGAGCCCT TGGGCGTTGT TTTTGGGTAA AGTGAAGCTG
GATTTTCAAG TGGGTAGCCG TGCAACCCCA GTGAGTGCCA AAGGGTTAAT CACTTGGTCT
ATGGGCGGTA TCAGCGCTCA AGGATTGCGT TTTGAGGCGC CCGATAGTTT CTTGATTGGC
AATGCTAAAC TGCCCTTTAG AACCGAAATT AACGGTGAAG TCAGCCTGCT GGTCGAAACC
CTAGAACAAG GTAAACCTTG GTGCGAGCAG CTATCGGGCA AGTTGTTTTT AAATCAAACC
AATGTGAAGA ACCAATTCGG TAATTATCCA CTGGGTAATA TCGAGTTGGG GCTAAGTTGT
GTTGAGGGTA AAGCCCAGCT CGCCACCGAT GAGAGCAAAA ACCAGTTGGG GATTATCGGC
ACGCTGCAGC TAGATGAAGG CAATATGGTT AAGGTTGCCG CTAAGATTAA AGAAACCAAC
GAACAGCCAG AAGATATGCG TAAATCCCTC GGGATGCTCG GCAAGCGTGG CAGCGATGGT
TACTTCCCTG TGGTTTATCA GGGGCGTATT CCTGGGCTCT AA
|
|---|
| Protein sequence | MSLIKKIIIG VLVYLVFLLA LFPASVAVRL APLPANVGIS GVSGSIWSGS IETLNLQQRQ
LEQVRWELSP WALFLGKVKL DFQVGSRATP VSAKGLITWS MGGISAQGLR FEAPDSFLIG
NAKLPFRTEI NGEVSLLVET LEQGKPWCEQ LSGKLFLNQT NVKNQFGNYP LGNIELGLSC
VEGKAQLATD ESKNQLGIIG TLQLDEGNMV KVAAKIKETN EQPEDMRKSL GMLGKRGSDG
YFPVVYQGRI PGL
|
|---|
| |