Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0158 |
Symbol | |
ID | 4478295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 182078 |
End bp | 183076 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639724678 |
Product | general secretion pathway protein K |
Protein accession | YP_867808 |
Protein GI | 117918616 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3156] Type II secretory pathway, component PulK |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAGGC GAAATCCTGC TAAACAACGT GGCGTCGCGC TGATTGTGGT GTTGCTGATC GTGGCCATGG TGGTGATTAT CGCCACCAAT ATTACCAGCC GAAATCAGTT GTCAATGCGC CGCACCTTAA ACTTAGCCCA GTACGATCAG GCCTATTGGT ACGCAATTTC TGCCGAAGAG CTGGCGAAGA AGATCCTCAA GCAGGACTTG GACGATTCGG AAGGCCGTGT GCACAAGCAA CAATATTGGG CCATGAGCGA CGTGGTGTTT CCGGCGGAAT ATGGTGAGAT TGCAGGCAAG ATCACCGATA TGCGTTCGTG TTTTAACTTA AATGCTTTGT CCGTCACCAC AAAAGATGTG GAAAACGGTC AACCTAAATT GCCCTTAGCG GCAAAGCAAT ACAAAGCCTT ATTAGTGAGT TTAGGGATGG ATGATTTTAC CGCAGATCAT TTAACTCAAA CCCTAAAGGA TTATATCGAC GAGGACACTG TCGCGAGCCC ATATGGCGCC GAAGACGCCG AGTACGAAGC GCGAAATGTG CCATATCGCG CCGCGAATAC CCTGATGAAT CACAGGAGTG AGCTGCGGGC GGTGATAGGT TACACCCAAG ATATTTATTT GAAATTATTG CCTTATATTT GCGTCATCCC AGGGAATGAC AGACAACTGT TAAACGTGAA CACCATTGAT GTCGAGCAAG CGGCGCTGCT GGCGGCCATG CTGGATAATC AGATATCGGT TGGTGAGGCC GAAAGCATTA TCAACCAACG CCCCGGCGAT GGTTTTGCCA AGATCGATGA TTTTTATGAA TCCTCCTCGA TGGGGTCGAT TAAGTGGGAA GATGCGATGA AGTCCAGTTT TGTGGTGGAC AGTCAGTACT TCCTCCTCGC CTCGGGCGCT AAGGTCGATA ACGCCATTTT TAGGATGGAG AGTGTGCTCA AAAAGGGCAG CGGTAACAAA ATGGATGTGC TCACCCGTCA GTTTGGTGGA CAAAAATAA
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Protein sequence | MIRRNPAKQR GVALIVVLLI VAMVVIIATN ITSRNQLSMR RTLNLAQYDQ AYWYAISAEE LAKKILKQDL DDSEGRVHKQ QYWAMSDVVF PAEYGEIAGK ITDMRSCFNL NALSVTTKDV ENGQPKLPLA AKQYKALLVS LGMDDFTADH LTQTLKDYID EDTVASPYGA EDAEYEARNV PYRAANTLMN HRSELRAVIG YTQDIYLKLL PYICVIPGND RQLLNVNTID VEQAALLAAM LDNQISVGEA ESIINQRPGD GFAKIDDFYE SSSMGSIKWE DAMKSSFVVD SQYFLLASGA KVDNAIFRME SVLKKGSGNK MDVLTRQFGG QK
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