Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0155 |
Symbol | |
ID | 4478292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 180406 |
End bp | 180978 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639724675 |
Product | general secretion pathway protein H |
Protein accession | YP_867805 |
Protein GI | 117918613 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | [TIGR01708] general secretion pathway protein H [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAACGC TGCGCCACGC CGGCTTCACC TTGATGGAGG TGATGCTGGT GATTTTGTTA ATGGGACTCA CCGCTGCAGC GGTGACTATG TCTATTGGCA ATTCAGGCTC ACAACAGGCG CTGGAAAAAA ATGCGCAGCA ATTTATCGCC GCCACAGAGC TAGTGCTGGA TGAAACCGTA TTGAGCGGTC AATTTATCGG TATCGTGGTG GAAAAGACCA GCTATCAGTT TGTTTATTAT AAAGATGGTA AATGGAATCC ATTGGAGAAG GACAGGATTC TGTCTGAAAA ACAAATGGAA CCCGGCGTCG TGCTGAATCT GGTGCTCGAC GGTTTACCTT TAGTGCAGGA GGATGAGAAG GACGAGTCGT GGTTCGACGA GCCCTTAATC GAGCCTTCTG CGGAAGATAA GAAAAAGCAT CCAGAGCCGC AGATTTTGCT GTTTCCGAGT GGTGAAATGA GCGCCTTCGA ACTGAGCTTT ATGACCAAGA CCGACAAGGG GCCACTCGAT GTATTAGTGG TGGGCGATGC CCTTGGCCGT TTAACCCTAG GGCGACCCGA TGAAATACGC TAA
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Protein sequence | MLTLRHAGFT LMEVMLVILL MGLTAAAVTM SIGNSGSQQA LEKNAQQFIA ATELVLDETV LSGQFIGIVV EKTSYQFVYY KDGKWNPLEK DRILSEKQME PGVVLNLVLD GLPLVQEDEK DESWFDEPLI EPSAEDKKKH PEPQILLFPS GEMSAFELSF MTKTDKGPLD VLVVGDALGR LTLGRPDEIR
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