Gene Shewana3_0147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0147 
Symbol 
ID4477296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp170761 
End bp172302 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content53% 
IMG OID639724667 
Productphosphoenolpyruvate carboxykinase 
Protein accessionYP_867797 
Protein GI117918605 
COG category[C] Energy production and conversion 
COG ID[COG1866] Phosphoenolpyruvate carboxykinase (ATP) 
TIGRFAM ID[TIGR00224] phosphoenolpyruvate carboxykinase (ATP) 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGATG GATTAAACCG CGTTCACTAC AACCCCTCAA CAGCACAACT GGTCGAATTT 
GCCCTGCTAC GCGGCGAAGG TGAATTGACT GCAAACGGCG CACTGGTTGC TAAAACCGGT
ACCCGCACAG GTCGCTCTCC TGGCGATCGC TTCATTGTAA AAGAAGACAG TTCAGCGGCT
GACATCGAAT GGGGCCCCGT CAACCAAGCA TTTGAACCCG GTGCTTTTGA AGGATTATGG
GCGCGTGTAG AAGCATTCCT CGCCGATAAA GAGTTGTTTG TATCTGACCT CGAAGTCGGT
GCAGACCCAG AACATTACCA GCCAGTGCGT GTGACGACTC AATACGCTTG GCACCAACTG
TTCGCCCGCA ACCTTTTTAT CATCCCAGAA GAATTTAACC GTCAAGACAA GCCTGTATGG
CAAATCATCA ACGCGCCAGA CTTCGTCTGT GTTCCTGAGC GTGATGGCAC CAATTCAGAT
GCAGCGGTGA TCTTAAACTT TGCCGAGCGC AAAGTGTTGC TAGCGGGCCT GAAATACGCT
GGCGAAATGA AGAAGTCGAT GTTCTCTGTA CAAAACTTCC TGCTGCCAGC CCAAGGCGTA
TTGCCAATGC ACTGCTCGGC AAACGTAGGT AAAGACGGCG ACACTACCCT ATTCTTCGGT
CTGTCAGGCA CGGGTAAAAC CACCCTGTCT GCGGATCCAA AACGCTTCCT GATCGGTGAC
GATGAGCACG GCTGGGCACC AGGCGGCGTA TTCAACATCG AAGGCGGCTG CTACGCCAAG
TGTATCGATC TGAGCCAAAA GAACGAGCCA GTGATTTGGG ATGCGATTCG CTTCGGTACT
GTGCTGGAAA ACGTGGTAAT GGACGAGCAC CGCGTGCCTA ACTACAAAGA CAGCAGCCTG
ACGGAAAACA CCCGTGCAGC TTACCCACTC GAGCATATCG CTCAGCGTAA AGAAGACAAC
CGTGGCGCCG AGCCGCACGC AGTGGTGTTC TTAACCTGCG ACGTGTCTGG CGTATTACCA
CCGGTTTCTA TCCTGAGCAA AGAGCAAGCG GCTTACCACT TCCTCTCTGG TTACACCGCT
AAAGTCGGTT CGACTGAAAT CGGTTCAACC TCAGCGATTC AGTCAACCTT CTCTACTTGC
TTCGGCGCGC CTTTCTTCCC ACGTCCTGCG GGCGTGTATG CAGAGCTGCT GATGAAGCGT
ATCGAATCAT TCGGTAGCCA AGTGTACTTA GTTAACACTG GCTGGACTGG CGGTCCACAC
GGTATTGGTA AACGTTTCGA TATCCCAACG ACGCGCGCAA TTGTCGATGC GATTGTCAGC
GGTGAGCTGA AAAACGTCGA AACCGTACAC TTAGAGACAC TGAATCTGGC CGTGCCTGTC
GCGGTACCCG GTGTAGACAC TAACCTACTC AACCCAGTGA ACACTTGGAG CGATAAGGCA
CTCTACGCCG AATACGCCCA AAAACTGGCC GAAGCCTTCA CTAAGAACTT CGCTAAGTAC
CAAGTGTCAG ATGCCATCCG AAACGCTGGC CCAAAGGCAT AA
 
Protein sequence
MADGLNRVHY NPSTAQLVEF ALLRGEGELT ANGALVAKTG TRTGRSPGDR FIVKEDSSAA 
DIEWGPVNQA FEPGAFEGLW ARVEAFLADK ELFVSDLEVG ADPEHYQPVR VTTQYAWHQL
FARNLFIIPE EFNRQDKPVW QIINAPDFVC VPERDGTNSD AAVILNFAER KVLLAGLKYA
GEMKKSMFSV QNFLLPAQGV LPMHCSANVG KDGDTTLFFG LSGTGKTTLS ADPKRFLIGD
DEHGWAPGGV FNIEGGCYAK CIDLSQKNEP VIWDAIRFGT VLENVVMDEH RVPNYKDSSL
TENTRAAYPL EHIAQRKEDN RGAEPHAVVF LTCDVSGVLP PVSILSKEQA AYHFLSGYTA
KVGSTEIGST SAIQSTFSTC FGAPFFPRPA GVYAELLMKR IESFGSQVYL VNTGWTGGPH
GIGKRFDIPT TRAIVDAIVS GELKNVETVH LETLNLAVPV AVPGVDTNLL NPVNTWSDKA
LYAEYAQKLA EAFTKNFAKY QVSDAIRNAG PKA