| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0139 |
|---|
| Symbol | |
|---|
| ID | 4477288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 158822 |
|---|
| End bp | 159589 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639724659 |
|---|
| Product | methyltransferase type 12 |
|---|
| Protein accession | YP_867789 |
|---|
| Protein GI | 117918597 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTACT TAATGACCAA TAAAATCGCT TGGGATGCCC GCACTCGAGT GCACTTAACC
TCTGATTTTT ATGATGTTGA AGGCTTTTTG AATGGCAAAA CATCTCTAAC GGAAATTGAA
TTAAATGAGC TTGCGGTGGC GGGCAAAAGT CTACTGCATC TGCAATGTCA TTTTGGTTTA
GACACCCTGT CGTGGGCGCG AATGGGCGCA AAAGTGACTG GGGTCGATTT ATCCGAGGTG
GCGATTGCTG AGGCGCGCAA GCTGGCGCTG CAGACGCAAT TGTCCGCCGA GTTTATCTGT
AGCGATGTTT ACAGTGTGGC GGGCAAGGTT GAGCCGCAAG ATATTGTCTT TACCTCCTAT
GGCGCCATTG TGTGGCTGCC GGATTTAACA CTCTGGGCGC AGACCATTGC GGCGTGTTTA
AAGCCCGGCG GACAGTTTTA CATGGCCGAG TTTCATCCGG CGCAGCAACT ATTCGATGGA
TATAGCTATT TTAATCGCGG TGAGCCAGAT ATTGAGCAGG AAGGGACCTA TACCGAGAAT
GCCGGTGATG AGCAGCAGAC CTTAATGTGC TGGTCCCATA GCTTGTCTGA AGTGACCAAT
GCCTTGTTGC AGGCGGGTTT AGTGCTGGAG TTCTTCCACG AATTTGCGTT TAGCCCCTAT
AACTGTTTCG CAGGGCTAGA GGCGCAAGCC GATAGCCGTT ATGTACTAAT ACACCAAGGG
CAACATGTGC CCTTGGTGTA TAGCATAAGC GCGCGTAAGC CTGCTTAA
|
|---|
| Protein sequence | MDYLMTNKIA WDARTRVHLT SDFYDVEGFL NGKTSLTEIE LNELAVAGKS LLHLQCHFGL
DTLSWARMGA KVTGVDLSEV AIAEARKLAL QTQLSAEFIC SDVYSVAGKV EPQDIVFTSY
GAIVWLPDLT LWAQTIAACL KPGGQFYMAE FHPAQQLFDG YSYFNRGEPD IEQEGTYTEN
AGDEQQTLMC WSHSLSEVTN ALLQAGLVLE FFHEFAFSPY NCFAGLEAQA DSRYVLIHQG
QHVPLVYSIS ARKPA
|
|---|
| |