Gene Shewana3_0136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0136 
Symbol 
ID4477285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp155558 
End bp155980 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content50% 
IMG OID639724656 
Productexcinuclease ABC subunit C 
Protein accessionYP_867786 
Protein GI117918594 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.228252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGAAG CTGCTAATTC AACTCCCTCG GCTAGCCCCA AAAAAGGGGC TAGCCAAACT 
CAAGCTGCTA ACCAAGCTCA GCTGTCGAGC AAGCCAGAAG CGCTAGGTGC TGAGCAAGCT
GTTACTTCGG AGCAAGGCGC AACATCAGAG ATAGAACAAG TCTCGATGTG GTATCTGTAT
CTTATCCGCT GCGCCAATGG TCACTTATAC ACAGGCATCA CCACAGATGT CGCACGCCGC
TTTAACGAAC ATCAATCAAG CAGTCCCAAA GCTGCAAAGT ACCTGCGCGG CAAAGGGCCA
TTAACCCTAA TGTATCAAGA ACCAGTCGGC ACTCGCAGCG ATGCGCTAAG GCGTGAAATC
GCAGTTAAAA AGTTAAGCCG CAATCAAAAG CTGGCGTTGA TTGAATCTGC TGAACATAGA
TAG
 
Protein sequence
MIEAANSTPS ASPKKGASQT QAANQAQLSS KPEALGAEQA VTSEQGATSE IEQVSMWYLY 
LIRCANGHLY TGITTDVARR FNEHQSSSPK AAKYLRGKGP LTLMYQEPVG TRSDALRREI
AVKKLSRNQK LALIESAEHR