Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0136 |
Symbol | |
ID | 4477285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 155558 |
End bp | 155980 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639724656 |
Product | excinuclease ABC subunit C |
Protein accession | YP_867786 |
Protein GI | 117918594 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2827] Predicted endonuclease containing a URI domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.228252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTGAAG CTGCTAATTC AACTCCCTCG GCTAGCCCCA AAAAAGGGGC TAGCCAAACT CAAGCTGCTA ACCAAGCTCA GCTGTCGAGC AAGCCAGAAG CGCTAGGTGC TGAGCAAGCT GTTACTTCGG AGCAAGGCGC AACATCAGAG ATAGAACAAG TCTCGATGTG GTATCTGTAT CTTATCCGCT GCGCCAATGG TCACTTATAC ACAGGCATCA CCACAGATGT CGCACGCCGC TTTAACGAAC ATCAATCAAG CAGTCCCAAA GCTGCAAAGT ACCTGCGCGG CAAAGGGCCA TTAACCCTAA TGTATCAAGA ACCAGTCGGC ACTCGCAGCG ATGCGCTAAG GCGTGAAATC GCAGTTAAAA AGTTAAGCCG CAATCAAAAG CTGGCGTTGA TTGAATCTGC TGAACATAGA TAG
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Protein sequence | MIEAANSTPS ASPKKGASQT QAANQAQLSS KPEALGAEQA VTSEQGATSE IEQVSMWYLY LIRCANGHLY TGITTDVARR FNEHQSSSPK AAKYLRGKGP LTLMYQEPVG TRSDALRREI AVKKLSRNQK LALIESAEHR
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