Gene Shewana3_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0087 
Symbol 
ID4478023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp99482 
End bp100060 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content51% 
IMG OID639724607 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_867738 
Protein GI117918546 
COG category[R] General function prediction only 
COG ID[COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAA AGATTCTGGT TGTTTCTGGC CATCCCAAAC CCGATAGCCT GTGTGAACAT 
TTAGCCGACA CTTACGCCAA GGCTGCGGGC GAGTCGCATT CGGTGCGTCT GTTAAAGCTC
TGCGAGTTGG AATTTGAGCC TAATTTGGCG CACGGATACC ATCAAGAACA GCCATTAGAG
GCGGATTTGC AAAGCTTTCA GCAGGCTATT CTCTGGGCCG AGCATCTAGT GATTGTGGTG
CCCATTTGGT GGGGCAGCGT ACCCGCCAAG TTTAAAGGAT TAATTGATCG AACATTTTTA
CCCGGTTTTG CTTTTCAGTA TCAGCAGGGG AAAACCTTTC CCAATCGGCT GCTCGAGGGG
AGAACCTCAC GCATTATCAT GACCATGGAT ACGCCGCCTT GGTATTACAA GTGGTTCCAG
GGCGCGCCCG CCCTAAAGCA ATTAGATATC GCGACCTTAG CCTTTAGTGG TTTTAAGCGC
ACCAAGAGTC AAATGTTGGG GCCAGTGATC AATGCCAAGG CGCAGCAAGT GCAAAACTGG
CAAGCGCAAG TTGAACGGCA TGGCAGGTTG GGGCGTTAA
 
Protein sequence
MTKKILVVSG HPKPDSLCEH LADTYAKAAG ESHSVRLLKL CELEFEPNLA HGYHQEQPLE 
ADLQSFQQAI LWAEHLVIVV PIWWGSVPAK FKGLIDRTFL PGFAFQYQQG KTFPNRLLEG
RTSRIIMTMD TPPWYYKWFQ GAPALKQLDI ATLAFSGFKR TKSQMLGPVI NAKAQQVQNW
QAQVERHGRL GR