Gene Shewana3_0077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0077 
Symbol 
ID4478013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp89769 
End bp90134 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content54% 
IMG OID639724597 
ProductGntR family transcriptional regulator 
Protein accessionYP_867728 
Protein GI117918536 
COG category[K] Transcription 
COG ID[COG1725] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000256514 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTAGAAC TTTTAAATGT CAACCCCAGC AGTGGTGAGC CAATTTACAA GCAATTACAC 
GAGCAAATCG TGCGCTTGAT TGTGGGCGGC CAGTTGCAAG AGGAAGACGT ATTACCCTCA
GTGCGCCAAA TTGCTGAATA TCTTGCGGTC AATCCGATGA CGGTGTCCCG CGCGATTCAG
CAATTGGTCG ATCAGGGTTG GCTAGAACGT CGCCGTGGTC AGGCGACTAG GGTCGCGGCG
CGTACCGAGG CGATGGAGTC GGGCGTGAGT CTGCTCGAGC CGCAATTAGA TGCCTTGCTG
GCGCAGGCAA AGCAGCTGGG CGTGAGTCTG CCCGAATTAC TGCAATTGAT TAATGAGCGT
TGGTAG
 
Protein sequence
MLELLNVNPS SGEPIYKQLH EQIVRLIVGG QLQEEDVLPS VRQIAEYLAV NPMTVSRAIQ 
QLVDQGWLER RRGQATRVAA RTEAMESGVS LLEPQLDALL AQAKQLGVSL PELLQLINER
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