Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0077 |
Symbol | |
ID | 4478013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 89769 |
End bp | 90134 |
Gene Length | 366 bp |
Protein Length | 121 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639724597 |
Product | GntR family transcriptional regulator |
Protein accession | YP_867728 |
Protein GI | 117918536 |
COG category | [K] Transcription |
COG ID | [COG1725] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000256514 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTTAGAAC TTTTAAATGT CAACCCCAGC AGTGGTGAGC CAATTTACAA GCAATTACAC GAGCAAATCG TGCGCTTGAT TGTGGGCGGC CAGTTGCAAG AGGAAGACGT ATTACCCTCA GTGCGCCAAA TTGCTGAATA TCTTGCGGTC AATCCGATGA CGGTGTCCCG CGCGATTCAG CAATTGGTCG ATCAGGGTTG GCTAGAACGT CGCCGTGGTC AGGCGACTAG GGTCGCGGCG CGTACCGAGG CGATGGAGTC GGGCGTGAGT CTGCTCGAGC CGCAATTAGA TGCCTTGCTG GCGCAGGCAA AGCAGCTGGG CGTGAGTCTG CCCGAATTAC TGCAATTGAT TAATGAGCGT TGGTAG
|
Protein sequence | MLELLNVNPS SGEPIYKQLH EQIVRLIVGG QLQEEDVLPS VRQIAEYLAV NPMTVSRAIQ QLVDQGWLER RRGQATRVAA RTEAMESGVS LLEPQLDALL AQAKQLGVSL PELLQLINER W
|
| |