| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0072 |
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| Symbol | |
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| ID | 4478008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 84734 |
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| End bp | 85777 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639724592 |
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| Product | transcriptional regulator |
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| Protein accession | YP_867723 |
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| Protein GI | 117918531 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000158985 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAGGA TCACTATTTT GGCGACGGAC AATACGGTTG CCAGCGGGAT TATTGGTTTT
CTCGATGTGT TTAGTTTCTG CAATACCTAT TGGCGGCGAG TCAATCCACA GGCCGAACAA
GACCTGTTTG AGTGCCAAGT GGTCTCGAGT CATGGCGGTG ATATCCTAAC GAATCAAGGT
ATTAAAGTGC CTGCCGTTGG GCTTAATACC CCGAATGATA TTCTGCACTC CGATGCGGTG
ATTTTGGCTT CGGCCATGGT GACCAATAAA AGCGAGTTTC AAAACTATCT TCATGATTTT
GAATCCTTAT TCGAACCGTT AAGGCTGTTT GCCGACTCAG GTAAACCATT GGCGGCCTAT
TGCTCTGGCA CCTTGATTTT AGCGGCCTCC GGCCTGCTGG ACGGGCGTGA AGCGACCACC
GTCTGGTGGC TGAATGAGAT GTTTCAGCGA CATTTTGCCA AGGTGAACCT GCGGATGGAC
AAGCTGGTGG TGTCCGACGG CCATCTGCAT ACCGCGGGGG CGACAACCTC GAATATGAGC
CTCGCCCTGC ATTTAGTGCA CATTTTGGTG GGTGAGCAGT TAGCAAGCCA GATGGCAAAA
ATCCTGTTGA TTGATCCTAA TCGCCAATCC CAACAACCCT TTATGACCAT GGATCTGATG
ACGTCAAGCC ATAAGGACGA GGTGATTTGG AATGTGCAGC AATGGATGCA GCATCATTTA
ACCGAACCGC TGTTACTAGA TGATATTGCT GATAAATTTG CTTTAGGTAA GCGCACCCTT
ATTCGCCGCT TTAAAAAGGC ATTAAACGAG ACTCCGGCCA GCTATGTGCA GCGTCTGCGG
GTGGATGAGG CAAAACGCCT ATTGGAAACG ACCAGTTTAG GCTTAGAGGA AGTGGTCACC
CGTGTGGGTT ATGAGGATGT CAGCTCGTTT CGCAAATTAT TCATTCAGCT AACGAGCTTA
ACCCCGAGGG CCTACAGGCA GCGCTTTAAT ACTCAGCAAT ATGAGTTTGA TAGCGACAAC
TGCTGCGAGG CTGAACTGCA TTAA
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| Protein sequence | MKRITILATD NTVASGIIGF LDVFSFCNTY WRRVNPQAEQ DLFECQVVSS HGGDILTNQG
IKVPAVGLNT PNDILHSDAV ILASAMVTNK SEFQNYLHDF ESLFEPLRLF ADSGKPLAAY
CSGTLILAAS GLLDGREATT VWWLNEMFQR HFAKVNLRMD KLVVSDGHLH TAGATTSNMS
LALHLVHILV GEQLASQMAK ILLIDPNRQS QQPFMTMDLM TSSHKDEVIW NVQQWMQHHL
TEPLLLDDIA DKFALGKRTL IRRFKKALNE TPASYVQRLR VDEAKRLLET TSLGLEEVVT
RVGYEDVSSF RKLFIQLTSL TPRAYRQRFN TQQYEFDSDN CCEAELH
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